Strain Fitness in Dechlorosoma suillum PS around Dsui_2285

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2284 and Dsui_2285 are separated by 342 nucleotidesDsui_2285 and Dsui_2286 are separated by 26 nucleotidesDsui_2286 and Dsui_2287 are separated by 157 nucleotides Dsui_2284: Dsui_2284 - hypothetical protein, at 2,436,777 to 2,437,856 _2284 Dsui_2285: Dsui_2285 - hypothetical protein, at 2,438,199 to 2,439,014 _2285 Dsui_2286: Dsui_2286 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,439,041 to 2,439,835 _2286 Dsui_2287: Dsui_2287 - aminopeptidase N, at 2,439,993 to 2,442,602 _2287 Position (kb) 2438 2439 2440Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2437.260 kb on + strand, within Dsui_2284at 2437.260 kb on + strand, within Dsui_2284at 2437.260 kb on + strand, within Dsui_2284at 2437.263 kb on + strand, within Dsui_2284at 2437.263 kb on + strand, within Dsui_2284at 2437.265 kb on + strandat 2437.265 kb on + strandat 2437.270 kb on + strand, within Dsui_2284at 2437.270 kb on + strand, within Dsui_2284at 2437.270 kb on + strand, within Dsui_2284at 2437.270 kb on + strand, within Dsui_2284at 2437.270 kb on + strandat 2437.270 kb on + strand, within Dsui_2284at 2437.270 kb on + strand, within Dsui_2284at 2437.270 kb on + strandat 2437.280 kb on + strandat 2437.323 kb on + strandat 2437.340 kb on + strand, within Dsui_2284at 2437.363 kb on + strandat 2437.440 kb on + strand, within Dsui_2284at 2437.483 kb on + strand, within Dsui_2284at 2437.531 kb on + strandat 2437.534 kb on - strand, within Dsui_2284at 2437.535 kb on + strand, within Dsui_2284at 2437.570 kb on + strandat 2437.583 kb on + strand, within Dsui_2284at 2437.583 kb on + strandat 2437.604 kb on - strandat 2437.625 kb on - strand, within Dsui_2284at 2437.635 kb on - strand, within Dsui_2284at 2437.635 kb on - strand, within Dsui_2284at 2437.641 kb on + strand, within Dsui_2284at 2437.641 kb on + strand, within Dsui_2284at 2437.641 kb on + strand, within Dsui_2284at 2437.649 kb on - strand, within Dsui_2284at 2437.651 kb on + strandat 2437.672 kb on - strand, within Dsui_2284at 2437.679 kb on + strandat 2437.682 kb on - strandat 2437.682 kb on - strandat 2437.683 kb on + strandat 2437.696 kb on - strand, within Dsui_2284at 2437.696 kb on - strandat 2437.711 kb on + strandat 2437.736 kb on - strand, within Dsui_2284at 2437.742 kb on - strand, within Dsui_2284at 2437.763 kb on + strandat 2437.771 kb on - strandat 2437.771 kb on - strandat 2437.771 kb on - strandat 2437.776 kb on + strandat 2437.777 kb on - strandat 2437.777 kb on - strandat 2437.777 kb on - strandat 2437.799 kb on - strandat 2437.816 kb on - strandat 2437.820 kb on + strandat 2437.828 kb on + strandat 2437.828 kb on - strandat 2437.851 kb on + strandat 2437.852 kb on + strandat 2437.892 kb on - strandat 2437.934 kb on - strandat 2437.940 kb on - strandat 2437.940 kb on - strandat 2437.951 kb on + strandat 2438.027 kb on + strandat 2438.035 kb on - strandat 2438.035 kb on - strandat 2438.035 kb on - strandat 2438.035 kb on - strandat 2438.035 kb on - strandat 2438.035 kb on - strandat 2438.035 kb on - strandat 2438.035 kb on - strandat 2438.040 kb on - strandat 2438.040 kb on - strandat 2438.040 kb on - strandat 2438.040 kb on - strandat 2438.040 kb on - strandat 2438.063 kb on + strandat 2438.081 kb on + strandat 2438.081 kb on + strandat 2438.081 kb on + strandat 2438.081 kb on + strandat 2438.086 kb on + strandat 2438.089 kb on - strandat 2438.089 kb on - strandat 2438.089 kb on - strandat 2438.089 kb on - strandat 2438.089 kb on - strandat 2438.089 kb on - strandat 2438.089 kb on - strandat 2438.089 kb on - strandat 2438.099 kb on + strandat 2438.127 kb on - strandat 2438.148 kb on + strandat 2438.166 kb on - strandat 2438.176 kb on - strandat 2438.188 kb on - strandat 2438.209 kb on - strandat 2438.221 kb on + strandat 2438.236 kb on - strandat 2438.236 kb on - strandat 2438.420 kb on + strand, within Dsui_2285at 2438.428 kb on - strand, within Dsui_2285at 2438.428 kb on - strand, within Dsui_2285at 2438.457 kb on - strandat 2438.488 kb on - strand, within Dsui_2285at 2438.523 kb on - strand, within Dsui_2285at 2438.581 kb on - strand, within Dsui_2285at 2438.595 kb on + strand, within Dsui_2285at 2438.603 kb on - strandat 2438.704 kb on + strand, within Dsui_2285at 2438.754 kb on + strand, within Dsui_2285at 2438.756 kb on - strand, within Dsui_2285at 2438.759 kb on + strand, within Dsui_2285at 2438.762 kb on - strand, within Dsui_2285at 2438.762 kb on - strand, within Dsui_2285at 2438.766 kb on - strand, within Dsui_2285at 2438.835 kb on + strand, within Dsui_2285at 2438.848 kb on - strand, within Dsui_2285at 2438.849 kb on - strand, within Dsui_2285at 2438.972 kb on + strandat 2438.990 kb on + strandat 2439.087 kb on - strandat 2439.181 kb on - strand, within Dsui_2286at 2439.197 kb on - strand, within Dsui_2286at 2439.212 kb on - strand, within Dsui_2286at 2439.388 kb on + strandat 2439.483 kb on - strandat 2439.542 kb on + strandat 2439.595 kb on + strand, within Dsui_2286at 2439.837 kb on - strandat 2439.924 kb on + strandat 2439.924 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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2,437,260 + Dsui_2284 0.45 +0.6
2,437,260 + Dsui_2284 0.45 -2.7
2,437,260 + Dsui_2284 0.45 -0.4
2,437,263 + Dsui_2284 0.45 +0.6
2,437,263 + Dsui_2284 0.45 -0.2
2,437,265 + -3.1
2,437,265 + -2.3
2,437,270 + Dsui_2284 0.46 -1.0
2,437,270 + Dsui_2284 0.46 -0.9
2,437,270 + Dsui_2284 0.46 -2.5
2,437,270 + Dsui_2284 0.46 +0.1
2,437,270 + -2.8
2,437,270 + Dsui_2284 0.46 -0.1
2,437,270 + Dsui_2284 0.46 -1.0
2,437,270 + -3.2
2,437,280 + -1.1
2,437,323 + +0.6
2,437,340 + Dsui_2284 0.52 +0.5
2,437,363 + +0.1
2,437,440 + Dsui_2284 0.61 +0.6
2,437,483 + Dsui_2284 0.65 -0.6
2,437,531 + -0.7
2,437,534 - Dsui_2284 0.70 -2.3
2,437,535 + Dsui_2284 0.70 +0.1
2,437,570 + -2.6
2,437,583 + Dsui_2284 0.75 -2.7
2,437,583 + -2.1
2,437,604 - -0.1
2,437,625 - Dsui_2284 0.79 -0.8
2,437,635 - Dsui_2284 0.79 +0.8
2,437,635 - Dsui_2284 0.79 -3.7
2,437,641 + Dsui_2284 0.80 -3.3
2,437,641 + Dsui_2284 0.80 -1.6
2,437,641 + Dsui_2284 0.80 -0.2
2,437,649 - Dsui_2284 0.81 -0.3
2,437,651 + +2.1
2,437,672 - Dsui_2284 0.83 -0.5
2,437,679 + -2.6
2,437,682 - -2.3
2,437,682 - -2.3
2,437,683 + +0.3
2,437,696 - Dsui_2284 0.85 -0.8
2,437,696 - -0.4
2,437,711 + -2.1
2,437,736 - Dsui_2284 0.89 -1.4
2,437,742 - Dsui_2284 0.89 +0.2
2,437,763 + +0.1
2,437,771 - -1.0
2,437,771 - +1.6
2,437,771 - -2.1
2,437,776 + -3.5
2,437,777 - +0.5
2,437,777 - -1.6
2,437,777 - -0.7
2,437,799 - -1.2
2,437,816 - -0.9
2,437,820 + -2.1
2,437,828 + -2.3
2,437,828 - -0.7
2,437,851 + -3.4
2,437,852 + -2.7
2,437,892 - -0.7
2,437,934 - -0.5
2,437,940 - +0.5
2,437,940 - -2.7
2,437,951 + -0.7
2,438,027 + -1.7
2,438,035 - -1.5
2,438,035 - -1.8
2,438,035 - -2.7
2,438,035 - +0.2
2,438,035 - -2.2
2,438,035 - -0.9
2,438,035 - -2.5
2,438,035 - -2.8
2,438,040 - -0.6
2,438,040 - -1.5
2,438,040 - -0.7
2,438,040 - +0.0
2,438,040 - -2.0
2,438,063 + -1.8
2,438,081 + +0.1
2,438,081 + +0.1
2,438,081 + +0.7
2,438,081 + -1.9
2,438,086 + -0.6
2,438,089 - -1.6
2,438,089 - -1.0
2,438,089 - -1.0
2,438,089 - +1.1
2,438,089 - +1.3
2,438,089 - -2.6
2,438,089 - +0.7
2,438,089 - -0.0
2,438,099 + -2.3
2,438,127 - -1.5
2,438,148 + -0.7
2,438,166 - +1.4
2,438,176 - +0.4
2,438,188 - +1.2
2,438,209 - -1.1
2,438,221 + -1.8
2,438,236 - -0.4
2,438,236 - -0.5
2,438,420 + Dsui_2285 0.27 +0.4
2,438,428 - Dsui_2285 0.28 -2.9
2,438,428 - Dsui_2285 0.28 -3.2
2,438,457 - -1.7
2,438,488 - Dsui_2285 0.35 -2.9
2,438,523 - Dsui_2285 0.40 -1.3
2,438,581 - Dsui_2285 0.47 -1.3
2,438,595 + Dsui_2285 0.49 -1.0
2,438,603 - +1.4
2,438,704 + Dsui_2285 0.62 +0.7
2,438,754 + Dsui_2285 0.68 -2.3
2,438,756 - Dsui_2285 0.68 -0.5
2,438,759 + Dsui_2285 0.69 +0.7
2,438,762 - Dsui_2285 0.69 -0.7
2,438,762 - Dsui_2285 0.69 +0.5
2,438,766 - Dsui_2285 0.69 -0.2
2,438,835 + Dsui_2285 0.78 -0.2
2,438,848 - Dsui_2285 0.80 -1.3
2,438,849 - Dsui_2285 0.80 -3.0
2,438,972 + +0.2
2,438,990 + -1.2
2,439,087 - -0.9
2,439,181 - Dsui_2286 0.18 +0.4
2,439,197 - Dsui_2286 0.20 +1.2
2,439,212 - Dsui_2286 0.22 -1.1
2,439,388 + -3.4
2,439,483 - -0.3
2,439,542 + -0.9
2,439,595 + Dsui_2286 0.70 -1.6
2,439,837 - -1.1
2,439,924 + -0.4
2,439,924 + -0.6

Or see this region's nucleotide sequence