Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2221 and Dsui_2222 are separated by 68 nucleotides Dsui_2222 and Dsui_2223 are separated by 58 nucleotides
Dsui_2221: Dsui_2221 - putative ATPase, at 2,361,593 to 2,362,708
_2221
Dsui_2222: Dsui_2222 - type II secretory pathway, component PulD, at 2,362,777 to 2,363,682
_2222
Dsui_2223: Dsui_2223 - putative ATP-dependent protease, at 2,363,741 to 2,366,266
_2223
Position (kb)
2362
2363
2364 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2361.833 kb on - strand at 2361.917 kb on + strand, within Dsui_2221 at 2362.164 kb on + strand, within Dsui_2221 at 2362.233 kb on + strand, within Dsui_2221 at 2362.233 kb on + strand, within Dsui_2221 at 2362.302 kb on + strand, within Dsui_2221 at 2362.325 kb on - strand at 2362.475 kb on + strand, within Dsui_2221 at 2362.604 kb on + strand at 2362.606 kb on + strand at 2362.606 kb on + strand at 2362.614 kb on - strand at 2362.614 kb on - strand at 2362.774 kb on + strand at 2362.808 kb on + strand at 2362.818 kb on + strand at 2362.847 kb on - strand at 2362.851 kb on + strand at 2362.985 kb on + strand, within Dsui_2222 at 2363.048 kb on + strand, within Dsui_2222 at 2363.058 kb on + strand, within Dsui_2222 at 2363.073 kb on - strand, within Dsui_2222 at 2363.222 kb on + strand, within Dsui_2222 at 2363.222 kb on + strand, within Dsui_2222 at 2363.361 kb on + strand, within Dsui_2222 at 2363.420 kb on - strand, within Dsui_2222 at 2363.426 kb on + strand, within Dsui_2222 at 2363.473 kb on + strand, within Dsui_2222 at 2363.513 kb on + strand, within Dsui_2222 at 2363.729 kb on + strand at 2363.774 kb on + strand at 2363.837 kb on - strand at 2363.837 kb on - strand at 2363.854 kb on + strand at 2363.861 kb on + strand at 2363.915 kb on + strand at 2363.971 kb on - strand at 2363.993 kb on - strand at 2364.050 kb on - strand at 2364.264 kb on - strand at 2364.319 kb on + strand, within Dsui_2223 at 2364.351 kb on - strand at 2364.362 kb on - strand, within Dsui_2223 at 2364.415 kb on - strand, within Dsui_2223 at 2364.463 kb on + strand, within Dsui_2223 at 2364.528 kb on - strand at 2364.529 kb on + strand at 2364.558 kb on - strand at 2364.572 kb on + strand, within Dsui_2223 at 2364.597 kb on + strand, within Dsui_2223
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,361,833 - -1.5 2,361,917 + Dsui_2221 0.29 -0.3 2,362,164 + Dsui_2221 0.51 +2.3 2,362,233 + Dsui_2221 0.57 +0.1 2,362,233 + Dsui_2221 0.57 +1.0 2,362,302 + Dsui_2221 0.64 -0.2 2,362,325 - -2.7 2,362,475 + Dsui_2221 0.79 +0.8 2,362,604 + -0.2 2,362,606 + -0.0 2,362,606 + -1.0 2,362,614 - -1.7 2,362,614 - -2.8 2,362,774 + +0.2 2,362,808 + +0.5 2,362,818 + +0.6 2,362,847 - -1.6 2,362,851 + +0.9 2,362,985 + Dsui_2222 0.23 +1.9 2,363,048 + Dsui_2222 0.30 +1.3 2,363,058 + Dsui_2222 0.31 +0.7 2,363,073 - Dsui_2222 0.33 +0.1 2,363,222 + Dsui_2222 0.49 +1.1 2,363,222 + Dsui_2222 0.49 +1.3 2,363,361 + Dsui_2222 0.64 +1.2 2,363,420 - Dsui_2222 0.71 -1.5 2,363,426 + Dsui_2222 0.72 +1.1 2,363,473 + Dsui_2222 0.77 +1.4 2,363,513 + Dsui_2222 0.81 +1.3 2,363,729 + +0.4 2,363,774 + +0.9 2,363,837 - -2.4 2,363,837 - +1.0 2,363,854 + +0.9 2,363,861 + +0.7 2,363,915 + +1.0 2,363,971 - -0.3 2,363,993 - +1.7 2,364,050 - -0.7 2,364,264 - -1.4 2,364,319 + Dsui_2223 0.23 +0.7 2,364,351 - -1.6 2,364,362 - Dsui_2223 0.25 -0.7 2,364,415 - Dsui_2223 0.27 -1.2 2,364,463 + Dsui_2223 0.29 -0.0 2,364,528 - -2.8 2,364,529 + +1.2 2,364,558 - -1.1 2,364,572 + Dsui_2223 0.33 +3.6 2,364,597 + Dsui_2223 0.34 +1.0
Or see this region's nucleotide sequence