Strain Fitness in Dechlorosoma suillum PS around Dsui_2203

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2202 and Dsui_2203 are separated by 94 nucleotidesDsui_2203 and Dsui_2204 are separated by 132 nucleotides Dsui_2202: Dsui_2202 - parvulin-like peptidyl-prolyl isomerase, at 2,337,198 to 2,339,090 _2202 Dsui_2203: Dsui_2203 - enoyl-(acyl-carrier-protein) reductase (NADH), at 2,339,185 to 2,339,982 _2203 Dsui_2204: Dsui_2204 - ABC-type dipeptide transport system, periplasmic component, at 2,340,115 to 2,342,286 _2204 Position (kb) 2339 2340Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 2338.217 kb on + strand, within Dsui_2202at 2338.224 kb on + strand, within Dsui_2202at 2338.306 kb on + strand, within Dsui_2202at 2338.410 kb on - strand, within Dsui_2202at 2338.498 kb on + strand, within Dsui_2202at 2338.562 kb on + strand, within Dsui_2202at 2338.594 kb on + strand, within Dsui_2202at 2338.597 kb on + strand, within Dsui_2202at 2338.612 kb on + strand, within Dsui_2202at 2338.636 kb on + strand, within Dsui_2202at 2338.644 kb on - strand, within Dsui_2202at 2338.701 kb on + strand, within Dsui_2202at 2338.765 kb on + strand, within Dsui_2202at 2338.889 kb on - strand, within Dsui_2202at 2338.918 kb on - strandat 2339.011 kb on + strandat 2339.054 kb on + strandat 2339.062 kb on - strandat 2339.062 kb on - strandat 2339.169 kb on + strandat 2340.105 kb on + strandat 2340.207 kb on + strandat 2340.207 kb on + strandat 2340.207 kb on + strandat 2340.215 kb on - strandat 2340.264 kb on + strandat 2340.283 kb on + strandat 2340.283 kb on + strandat 2340.288 kb on + strandat 2340.288 kb on + strandat 2340.291 kb on - strandat 2340.296 kb on - strandat 2340.364 kb on + strand, within Dsui_2204at 2340.446 kb on + strand, within Dsui_2204at 2340.454 kb on - strand, within Dsui_2204at 2340.579 kb on + strand, within Dsui_2204at 2340.580 kb on - strandat 2340.605 kb on + strand, within Dsui_2204at 2340.637 kb on - strandat 2340.717 kb on + strand, within Dsui_2204at 2340.717 kb on + strand, within Dsui_2204at 2340.725 kb on - strand, within Dsui_2204at 2340.800 kb on + strand, within Dsui_2204at 2340.852 kb on + strand, within Dsui_2204at 2340.960 kb on + strand, within Dsui_2204

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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2,338,217 + Dsui_2202 0.54 +1.8
2,338,224 + Dsui_2202 0.54 +0.3
2,338,306 + Dsui_2202 0.59 -0.3
2,338,410 - Dsui_2202 0.64 -0.6
2,338,498 + Dsui_2202 0.69 -0.4
2,338,562 + Dsui_2202 0.72 -0.4
2,338,594 + Dsui_2202 0.74 -0.4
2,338,597 + Dsui_2202 0.74 -0.3
2,338,612 + Dsui_2202 0.75 +0.8
2,338,636 + Dsui_2202 0.76 +0.2
2,338,644 - Dsui_2202 0.76 -1.6
2,338,701 + Dsui_2202 0.79 +0.5
2,338,765 + Dsui_2202 0.83 -0.1
2,338,889 - Dsui_2202 0.89 -1.5
2,338,918 - +0.1
2,339,011 + +0.6
2,339,054 + +4.5
2,339,062 - +0.2
2,339,062 - +0.3
2,339,169 + -0.6
2,340,105 + -0.6
2,340,207 + -2.2
2,340,207 + -1.8
2,340,207 + -0.7
2,340,215 - -3.3
2,340,264 + -0.5
2,340,283 + -0.7
2,340,283 + -0.8
2,340,288 + -0.8
2,340,288 + -1.3
2,340,291 - -2.3
2,340,296 - -2.2
2,340,364 + Dsui_2204 0.11 -1.4
2,340,446 + Dsui_2204 0.15 -0.3
2,340,454 - Dsui_2204 0.16 -3.9
2,340,579 + Dsui_2204 0.21 -0.8
2,340,580 - -2.8
2,340,605 + Dsui_2204 0.23 +0.3
2,340,637 - -1.3
2,340,717 + Dsui_2204 0.28 -0.6
2,340,717 + Dsui_2204 0.28 -0.1
2,340,725 - Dsui_2204 0.28 -3.3
2,340,800 + Dsui_2204 0.32 -0.3
2,340,852 + Dsui_2204 0.34 -0.9
2,340,960 + Dsui_2204 0.39 -0.7

Or see this region's nucleotide sequence