Strain Fitness in Dechlorosoma suillum PS around Dsui_2185

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2183 and Dsui_2184 are separated by 114 nucleotidesDsui_2184 and Dsui_2185 are separated by 71 nucleotidesDsui_2185 and Dsui_2186 are separated by 185 nucleotidesDsui_2186 and Dsui_2187 are separated by 70 nucleotides Dsui_2183: Dsui_2183 - aldose 1-epimerase-like enzyme, at 2,318,747 to 2,319,619 _2183 Dsui_2184: Dsui_2184 - hypothetical protein, at 2,319,734 to 2,320,282 _2184 Dsui_2185: Dsui_2185 - DNA-3-methyladenine glycosylase I, at 2,320,354 to 2,320,926 _2185 Dsui_2186: Dsui_2186 - Protein of unknown function (DUF3567), at 2,321,112 to 2,321,345 _2186 Dsui_2187: Dsui_2187 - acyl-CoA synthetase/AMP-acid ligase, at 2,321,416 to 2,323,113 _2187 Position (kb) 2320 2321Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2319.369 kb on - strand, within Dsui_2183at 2319.402 kb on - strand, within Dsui_2183at 2319.564 kb on - strandat 2319.874 kb on + strandat 2319.977 kb on + strand, within Dsui_2184at 2320.260 kb on - strandat 2320.299 kb on - strandat 2320.402 kb on + strandat 2320.425 kb on + strand, within Dsui_2185at 2320.477 kb on - strandat 2320.619 kb on - strand, within Dsui_2185at 2320.650 kb on + strandat 2320.697 kb on + strandat 2320.784 kb on + strand, within Dsui_2185at 2320.901 kb on - strandat 2320.978 kb on + strandat 2321.011 kb on + strandat 2321.018 kb on - strandat 2321.045 kb on - strandat 2321.155 kb on + strand, within Dsui_2186at 2321.317 kb on + strand, within Dsui_2186at 2321.353 kb on - strandat 2321.435 kb on - strandat 2321.534 kb on + strandat 2321.542 kb on - strandat 2321.542 kb on - strandat 2321.660 kb on - strandat 2321.833 kb on - strandat 2321.852 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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2,319,369 - Dsui_2183 0.71 -3.6
2,319,402 - Dsui_2183 0.75 +0.8
2,319,564 - +2.3
2,319,874 + -0.2
2,319,977 + Dsui_2184 0.44 -1.8
2,320,260 - +0.6
2,320,299 - +0.2
2,320,402 + +1.0
2,320,425 + Dsui_2185 0.12 -1.2
2,320,477 - +1.3
2,320,619 - Dsui_2185 0.46 +0.8
2,320,650 + -2.2
2,320,697 + -2.0
2,320,784 + Dsui_2185 0.75 -0.6
2,320,901 - +0.3
2,320,978 + +1.0
2,321,011 + +0.5
2,321,018 - -0.6
2,321,045 - -0.0
2,321,155 + Dsui_2186 0.18 +2.2
2,321,317 + Dsui_2186 0.88 +1.2
2,321,353 - -1.7
2,321,435 - -1.3
2,321,534 + +2.3
2,321,542 - -0.1
2,321,542 - -4.1
2,321,660 - +0.4
2,321,833 - +2.3
2,321,852 + -0.0

Or see this region's nucleotide sequence