Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1724 and Dsui_1725 overlap by 20 nucleotides Dsui_1725 and Dsui_1726 are separated by 12 nucleotides Dsui_1726 and Dsui_1727 overlap by 8 nucleotides Dsui_1727 and Dsui_1728 are separated by 4 nucleotides
Dsui_1724: Dsui_1724 - flagellar biosynthetic protein FlhF, at 1,815,505 to 1,816,872
_1724
Dsui_1725: Dsui_1725 - ATPase involved in chromosome partitioning, at 1,816,853 to 1,817,755
_1725
Dsui_1726: Dsui_1726 - RNA polymerase sigma factor, FliA/WhiG family, at 1,817,768 to 1,818,508
_1726
Dsui_1727: Dsui_1727 - flagellar motor component, at 1,818,501 to 1,819,241
_1727
Dsui_1728: Dsui_1728 - flagellar motor protein, at 1,819,246 to 1,820,097
_1728
Position (kb) 1817
1818
1819 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1816.927 kb on - strand at 1817.019 kb on - strand, within Dsui_1725 at 1817.019 kb on - strand at 1817.230 kb on - strand, within Dsui_1725 at 1817.236 kb on - strand, within Dsui_1725 at 1817.376 kb on + strand, within Dsui_1725 at 1817.443 kb on + strand, within Dsui_1725 at 1817.451 kb on - strand, within Dsui_1725 at 1817.517 kb on + strand, within Dsui_1725 at 1817.540 kb on + strand, within Dsui_1725 at 1817.548 kb on - strand, within Dsui_1725 at 1817.655 kb on + strand, within Dsui_1725 at 1817.655 kb on + strand, within Dsui_1725 at 1817.749 kb on - strand at 1817.750 kb on + strand at 1817.891 kb on + strand, within Dsui_1726 at 1817.914 kb on + strand, within Dsui_1726 at 1817.918 kb on - strand, within Dsui_1726 at 1817.956 kb on + strand, within Dsui_1726 at 1818.032 kb on + strand, within Dsui_1726 at 1818.059 kb on + strand, within Dsui_1726 at 1818.125 kb on + strand, within Dsui_1726 at 1818.133 kb on - strand, within Dsui_1726 at 1818.133 kb on - strand, within Dsui_1726 at 1818.178 kb on - strand, within Dsui_1726 at 1818.233 kb on - strand, within Dsui_1726 at 1818.312 kb on + strand, within Dsui_1726 at 1818.357 kb on + strand, within Dsui_1726 at 1818.365 kb on - strand, within Dsui_1726 at 1818.447 kb on - strand at 1818.448 kb on - strand at 1818.609 kb on - strand, within Dsui_1727 at 1818.628 kb on - strand, within Dsui_1727 at 1818.660 kb on - strand at 1818.703 kb on - strand, within Dsui_1727 at 1818.722 kb on + strand, within Dsui_1727 at 1818.831 kb on + strand, within Dsui_1727 at 1818.879 kb on + strand, within Dsui_1727 at 1818.880 kb on + strand, within Dsui_1727 at 1818.991 kb on - strand, within Dsui_1727 at 1818.998 kb on - strand, within Dsui_1727 at 1819.220 kb on + strand at 1819.378 kb on + strand, within Dsui_1728 at 1819.383 kb on + strand, within Dsui_1728 at 1819.502 kb on - strand, within Dsui_1728
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,816,927 - -0.9 1,817,019 - Dsui_1725 0.18 +0.1 1,817,019 - -3.4 1,817,230 - Dsui_1725 0.42 -0.7 1,817,236 - Dsui_1725 0.42 -0.9 1,817,376 + Dsui_1725 0.58 +1.1 1,817,443 + Dsui_1725 0.65 +1.0 1,817,451 - Dsui_1725 0.66 -0.6 1,817,517 + Dsui_1725 0.74 +0.8 1,817,540 + Dsui_1725 0.76 +0.5 1,817,548 - Dsui_1725 0.77 +0.9 1,817,655 + Dsui_1725 0.89 +0.9 1,817,655 + Dsui_1725 0.89 +1.7 1,817,749 - -1.1 1,817,750 + +1.5 1,817,891 + Dsui_1726 0.17 +1.0 1,817,914 + Dsui_1726 0.20 +1.3 1,817,918 - Dsui_1726 0.20 -0.1 1,817,956 + Dsui_1726 0.25 +1.4 1,818,032 + Dsui_1726 0.36 +1.5 1,818,059 + Dsui_1726 0.39 +0.7 1,818,125 + Dsui_1726 0.48 +0.9 1,818,133 - Dsui_1726 0.49 -0.8 1,818,133 - Dsui_1726 0.49 +0.3 1,818,178 - Dsui_1726 0.55 -0.5 1,818,233 - Dsui_1726 0.63 +0.7 1,818,312 + Dsui_1726 0.73 +2.3 1,818,357 + Dsui_1726 0.79 +0.4 1,818,365 - Dsui_1726 0.81 -0.1 1,818,447 - +0.6 1,818,448 - -1.2 1,818,609 - Dsui_1727 0.15 +0.6 1,818,628 - Dsui_1727 0.17 -1.3 1,818,660 - -2.9 1,818,703 - Dsui_1727 0.27 +1.6 1,818,722 + Dsui_1727 0.30 +1.0 1,818,831 + Dsui_1727 0.45 +0.8 1,818,879 + Dsui_1727 0.51 +1.2 1,818,880 + Dsui_1727 0.51 -1.5 1,818,991 - Dsui_1727 0.66 +0.4 1,818,998 - Dsui_1727 0.67 +1.2 1,819,220 + +0.7 1,819,378 + Dsui_1728 0.15 +1.3 1,819,383 + Dsui_1728 0.16 +0.7 1,819,502 - Dsui_1728 0.30 -0.1
Or see this region's nucleotide sequence