Strain Fitness in Dechlorosoma suillum PS around Dsui_1638

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1637 and Dsui_1638 overlap by 4 nucleotidesDsui_1638 and Dsui_1639 overlap by 1 nucleotidesDsui_1639 and Dsui_1640 are separated by 124 nucleotides Dsui_1637: Dsui_1637 - 2-nitropropane dioxygenase-like enzyme, at 1,720,399 to 1,721,562 _1637 Dsui_1638: Dsui_1638 - methyl-accepting chemotaxis protein, at 1,721,559 to 1,722,224 _1638 Dsui_1639: Dsui_1639 - putative flavoprotein, at 1,722,224 to 1,722,964 _1639 Dsui_1640: Dsui_1640 - hypothetical protein, at 1,723,089 to 1,723,541 _1640 Position (kb) 1721 1722 1723Strain fitness (log2 ratio) -2 -1 0 1 2at 1720.654 kb on + strand, within Dsui_1637at 1720.671 kb on + strand, within Dsui_1637at 1720.969 kb on - strand, within Dsui_1637at 1721.136 kb on - strand, within Dsui_1637at 1721.566 kb on - strandat 1721.571 kb on - strandat 1721.588 kb on + strandat 1721.620 kb on + strandat 1721.681 kb on + strand, within Dsui_1638at 1721.681 kb on + strand, within Dsui_1638at 1721.689 kb on - strand, within Dsui_1638at 1721.717 kb on + strand, within Dsui_1638at 1721.773 kb on + strand, within Dsui_1638at 1721.786 kb on + strand, within Dsui_1638at 1721.824 kb on + strand, within Dsui_1638at 1721.858 kb on - strand, within Dsui_1638at 1721.907 kb on - strand, within Dsui_1638at 1722.080 kb on - strand, within Dsui_1638at 1722.178 kb on + strandat 1722.180 kb on + strandat 1722.362 kb on - strand, within Dsui_1639at 1722.479 kb on + strand, within Dsui_1639at 1722.511 kb on + strand, within Dsui_1639at 1722.601 kb on - strand, within Dsui_1639at 1722.615 kb on + strand, within Dsui_1639at 1722.623 kb on - strand, within Dsui_1639at 1722.743 kb on + strand, within Dsui_1639at 1722.968 kb on - strandat 1722.995 kb on + strandat 1723.174 kb on - strand, within Dsui_1640

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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1,720,654 + Dsui_1637 0.22 -1.9
1,720,671 + Dsui_1637 0.23 -1.1
1,720,969 - Dsui_1637 0.49 -2.1
1,721,136 - Dsui_1637 0.63 -1.7
1,721,566 - -0.5
1,721,571 - +0.2
1,721,588 + +1.0
1,721,620 + +1.2
1,721,681 + Dsui_1638 0.18 +0.8
1,721,681 + Dsui_1638 0.18 +0.9
1,721,689 - Dsui_1638 0.20 +0.6
1,721,717 + Dsui_1638 0.24 +1.0
1,721,773 + Dsui_1638 0.32 +1.7
1,721,786 + Dsui_1638 0.34 +1.4
1,721,824 + Dsui_1638 0.40 +1.6
1,721,858 - Dsui_1638 0.45 +0.3
1,721,907 - Dsui_1638 0.52 +0.6
1,722,080 - Dsui_1638 0.78 -0.1
1,722,178 + +0.8
1,722,180 + +1.2
1,722,362 - Dsui_1639 0.19 -0.9
1,722,479 + Dsui_1639 0.34 +0.7
1,722,511 + Dsui_1639 0.39 +0.2
1,722,601 - Dsui_1639 0.51 +0.4
1,722,615 + Dsui_1639 0.53 +0.7
1,722,623 - Dsui_1639 0.54 +0.5
1,722,743 + Dsui_1639 0.70 +2.3
1,722,968 - -1.1
1,722,995 + +0.6
1,723,174 - Dsui_1640 0.19 +0.6

Or see this region's nucleotide sequence