Strain Fitness in Dechlorosoma suillum PS around Dsui_1598

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1597 and Dsui_1598 are separated by 174 nucleotidesDsui_1598 and Dsui_1599 are separated by 110 nucleotides Dsui_1597: Dsui_1597 - coproporphyrinogen III oxidase, at 1,678,199 to 1,679,107 _1597 Dsui_1598: Dsui_1598 - hypothetical protein, at 1,679,282 to 1,679,521 _1598 Dsui_1599: Dsui_1599 - putative enzyme of heme biosynthesis, at 1,679,632 to 1,680,834 _1599 Position (kb) 1679 1680Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1679.200 kb on - strandat 1679.305 kb on + strandat 1679.305 kb on + strandat 1679.305 kb on + strandat 1679.312 kb on - strand, within Dsui_1598at 1679.312 kb on - strand, within Dsui_1598at 1679.422 kb on - strand, within Dsui_1598at 1679.422 kb on - strand, within Dsui_1598at 1679.506 kb on + strandat 1679.514 kb on - strandat 1679.514 kb on - strandat 1679.519 kb on - strandat 1679.538 kb on - strandat 1679.748 kb on - strandat 1679.781 kb on - strand, within Dsui_1599at 1680.002 kb on + strand, within Dsui_1599at 1680.010 kb on - strand, within Dsui_1599at 1680.102 kb on + strand, within Dsui_1599at 1680.251 kb on + strand, within Dsui_1599at 1680.366 kb on + strand, within Dsui_1599at 1680.389 kb on - strand, within Dsui_1599at 1680.394 kb on + strand, within Dsui_1599

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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1,679,200 - +0.2
1,679,305 + +1.2
1,679,305 + +1.0
1,679,305 + -0.3
1,679,312 - Dsui_1598 0.12 +0.5
1,679,312 - Dsui_1598 0.12 +0.9
1,679,422 - Dsui_1598 0.58 +1.4
1,679,422 - Dsui_1598 0.58 +1.1
1,679,506 + -0.0
1,679,514 - +1.3
1,679,514 - +1.0
1,679,519 - +0.7
1,679,538 - +0.9
1,679,748 - -0.2
1,679,781 - Dsui_1599 0.12 -0.5
1,680,002 + Dsui_1599 0.31 -1.4
1,680,010 - Dsui_1599 0.31 -0.6
1,680,102 + Dsui_1599 0.39 -1.9
1,680,251 + Dsui_1599 0.51 -2.2
1,680,366 + Dsui_1599 0.61 -3.8
1,680,389 - Dsui_1599 0.63 +0.0
1,680,394 + Dsui_1599 0.63 +0.5

Or see this region's nucleotide sequence