Strain Fitness in Dechlorosoma suillum PS around Dsui_1590

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1588 and Dsui_1589 overlap by 1 nucleotidesDsui_1589 and Dsui_1590 are separated by 13 nucleotidesDsui_1590 and Dsui_1591 are separated by 111 nucleotides Dsui_1588: Dsui_1588 - aminoglycoside phosphotransferase, at 1,668,898 to 1,669,899 _1588 Dsui_1589: Dsui_1589 - Nucleoside-diphosphate-sugar pyrophosphorylase family protein, at 1,669,899 to 1,670,582 _1589 Dsui_1590: Dsui_1590 - hypothetical protein, at 1,670,596 to 1,670,868 _1590 Dsui_1591: Dsui_1591 - Xaa-Pro aminopeptidase, at 1,670,980 to 1,672,281 _1591 Position (kb) 1670 1671Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1669.610 kb on - strand, within Dsui_1588at 1669.790 kb on + strand, within Dsui_1588at 1669.884 kb on + strandat 1669.961 kb on + strandat 1670.068 kb on - strand, within Dsui_1589at 1670.075 kb on + strand, within Dsui_1589at 1670.110 kb on - strandat 1670.186 kb on + strand, within Dsui_1589at 1670.238 kb on + strand, within Dsui_1589at 1670.479 kb on + strand, within Dsui_1589at 1670.483 kb on + strand, within Dsui_1589at 1670.500 kb on + strand, within Dsui_1589at 1670.576 kb on + strandat 1670.807 kb on - strandat 1670.814 kb on + strand, within Dsui_1590at 1670.819 kb on + strand, within Dsui_1590at 1670.819 kb on + strand, within Dsui_1590at 1670.850 kb on + strandat 1670.850 kb on + strandat 1670.850 kb on + strandat 1670.858 kb on - strandat 1670.858 kb on - strandat 1670.914 kb on - strandat 1671.246 kb on + strand, within Dsui_1591at 1671.555 kb on + strand, within Dsui_1591at 1671.555 kb on + strand, within Dsui_1591at 1671.673 kb on + strand, within Dsui_1591at 1671.685 kb on + strand, within Dsui_1591at 1671.855 kb on + strand, within Dsui_1591

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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1,669,610 - Dsui_1588 0.71 +1.1
1,669,790 + Dsui_1588 0.89 +0.9
1,669,884 + +1.4
1,669,961 + -3.2
1,670,068 - Dsui_1589 0.25 -4.7
1,670,075 + Dsui_1589 0.26 +0.0
1,670,110 - -1.4
1,670,186 + Dsui_1589 0.42 -1.1
1,670,238 + Dsui_1589 0.50 -3.6
1,670,479 + Dsui_1589 0.85 -1.5
1,670,483 + Dsui_1589 0.85 -2.0
1,670,500 + Dsui_1589 0.88 -1.2
1,670,576 + +1.2
1,670,807 - +0.3
1,670,814 + Dsui_1590 0.80 +0.5
1,670,819 + Dsui_1590 0.82 +0.5
1,670,819 + Dsui_1590 0.82 +1.4
1,670,850 + +1.6
1,670,850 + +0.7
1,670,850 + +0.1
1,670,858 - +0.6
1,670,858 - +0.9
1,670,914 - +0.6
1,671,246 + Dsui_1591 0.20 -1.3
1,671,555 + Dsui_1591 0.44 -1.7
1,671,555 + Dsui_1591 0.44 -2.0
1,671,673 + Dsui_1591 0.53 -3.1
1,671,685 + Dsui_1591 0.54 -2.5
1,671,855 + Dsui_1591 0.67 -1.7

Or see this region's nucleotide sequence