Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1577 and Dsui_1578 are separated by 20 nucleotides Dsui_1578 and Dsui_1579 are separated by 214 nucleotides
Dsui_1577: Dsui_1577 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form, at 1,650,574 to 1,652,241
_1577
Dsui_1578: Dsui_1578 - pyruvate dehydrogenase E1 component, homodimeric type, at 1,652,262 to 1,654,934
_1578
Dsui_1579: Dsui_1579 - ABC-type branched-chain amino acid transport system, periplasmic component, at 1,655,149 to 1,656,357
_1579
Position (kb)
1652
1653
1654
1655 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1651.469 kb on - strand, within Dsui_1577 at 1652.161 kb on - strand at 1652.268 kb on + strand at 1652.292 kb on + strand at 1652.302 kb on + strand at 1652.388 kb on - strand at 1652.608 kb on - strand, within Dsui_1578 at 1652.886 kb on - strand, within Dsui_1578 at 1653.088 kb on + strand, within Dsui_1578 at 1653.106 kb on - strand, within Dsui_1578 at 1653.279 kb on + strand, within Dsui_1578 at 1653.294 kb on + strand, within Dsui_1578 at 1653.480 kb on - strand, within Dsui_1578 at 1653.646 kb on + strand, within Dsui_1578 at 1653.788 kb on - strand, within Dsui_1578 at 1653.857 kb on - strand, within Dsui_1578 at 1654.017 kb on + strand, within Dsui_1578 at 1654.105 kb on + strand, within Dsui_1578 at 1654.248 kb on + strand, within Dsui_1578 at 1654.389 kb on - strand, within Dsui_1578 at 1654.408 kb on + strand, within Dsui_1578 at 1654.781 kb on - strand at 1654.837 kb on - strand at 1654.985 kb on - strand at 1655.023 kb on - strand at 1655.073 kb on - strand at 1655.073 kb on - strand at 1655.083 kb on - strand at 1655.091 kb on - strand at 1655.155 kb on - strand at 1655.198 kb on + strand at 1655.203 kb on + strand at 1655.264 kb on - strand at 1655.342 kb on - strand, within Dsui_1579 at 1655.400 kb on - strand, within Dsui_1579 at 1655.405 kb on + strand, within Dsui_1579 at 1655.478 kb on - strand, within Dsui_1579 at 1655.523 kb on + strand, within Dsui_1579 at 1655.536 kb on - strand, within Dsui_1579 at 1655.705 kb on + strand at 1655.722 kb on - strand, within Dsui_1579 at 1655.732 kb on - strand, within Dsui_1579 at 1655.916 kb on - strand, within Dsui_1579
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,651,469 - Dsui_1577 0.54 -1.1 1,652,161 - -0.1 1,652,268 + +0.9 1,652,292 + -1.6 1,652,302 + -0.6 1,652,388 - +0.9 1,652,608 - Dsui_1578 0.13 -2.4 1,652,886 - Dsui_1578 0.23 -0.7 1,653,088 + Dsui_1578 0.31 -1.9 1,653,106 - Dsui_1578 0.32 -1.1 1,653,279 + Dsui_1578 0.38 -1.1 1,653,294 + Dsui_1578 0.39 -1.4 1,653,480 - Dsui_1578 0.46 +0.9 1,653,646 + Dsui_1578 0.52 -0.7 1,653,788 - Dsui_1578 0.57 -0.1 1,653,857 - Dsui_1578 0.60 +0.9 1,654,017 + Dsui_1578 0.66 -1.9 1,654,105 + Dsui_1578 0.69 -2.5 1,654,248 + Dsui_1578 0.74 -2.1 1,654,389 - Dsui_1578 0.80 -1.7 1,654,408 + Dsui_1578 0.80 -2.2 1,654,781 - -1.4 1,654,837 - -0.1 1,654,985 - -4.7 1,655,023 - +0.4 1,655,073 - -1.1 1,655,073 - +0.5 1,655,083 - +0.1 1,655,091 - +1.6 1,655,155 - +0.8 1,655,198 + +0.6 1,655,203 + -2.4 1,655,264 - +1.2 1,655,342 - Dsui_1579 0.16 +0.6 1,655,400 - Dsui_1579 0.21 -0.3 1,655,405 + Dsui_1579 0.21 -0.7 1,655,478 - Dsui_1579 0.27 +0.3 1,655,523 + Dsui_1579 0.31 +0.8 1,655,536 - Dsui_1579 0.32 +0.4 1,655,705 + -1.2 1,655,722 - Dsui_1579 0.47 +0.6 1,655,732 - Dsui_1579 0.48 +0.6 1,655,916 - Dsui_1579 0.63 +0.6
Or see this region's nucleotide sequence