Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1570 and Dsui_1571 are separated by 99 nucleotides Dsui_1571 and Dsui_1572 are separated by 83 nucleotides Dsui_1572 and Dsui_1573 are separated by 141 nucleotides Dsui_1573 and Dsui_1574 are separated by 82 nucleotides
Dsui_1570: Dsui_1570 - amino-acid N-acetyltransferase, at 1,643,087 to 1,644,433
_1570
Dsui_1571: Dsui_1571 - Fe-S cluster protector protein, at 1,644,533 to 1,644,805
_1571
Dsui_1572: Dsui_1572 - hypothetical protein, at 1,644,889 to 1,645,296
_1572
Dsui_1573: Dsui_1573 - phosphate transport system regulatory protein PhoU, at 1,645,438 to 1,646,148
_1573
Dsui_1574: Dsui_1574 - ribose 5-phosphate isomerase, at 1,646,231 to 1,646,902
_1574
Position (kb)
1644
1645
1646 Strain fitness (log2 ratio)
-1
0
1 at 1644.412 kb on + strand at 1644.477 kb on + strand at 1644.490 kb on - strand at 1644.775 kb on + strand, within Dsui_1571 at 1644.775 kb on + strand, within Dsui_1571 at 1644.783 kb on - strand at 1644.783 kb on - strand at 1644.789 kb on - strand at 1644.794 kb on + strand at 1644.921 kb on + strand at 1645.013 kb on - strand, within Dsui_1572 at 1645.071 kb on + strand, within Dsui_1572 at 1645.071 kb on + strand, within Dsui_1572 at 1645.129 kb on - strand, within Dsui_1572 at 1645.186 kb on + strand, within Dsui_1572 at 1645.194 kb on - strand at 1645.216 kb on - strand, within Dsui_1572 at 1645.408 kb on + strand at 1646.174 kb on - strand at 1646.236 kb on + strand at 1646.254 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,644,412 + +0.8 1,644,477 + +0.6 1,644,490 - +0.3 1,644,775 + Dsui_1571 0.89 +0.8 1,644,775 + Dsui_1571 0.89 +0.5 1,644,783 - +1.2 1,644,783 - -0.6 1,644,789 - -1.1 1,644,794 + +0.5 1,644,921 + +1.0 1,645,013 - Dsui_1572 0.30 +0.5 1,645,071 + Dsui_1572 0.45 +1.5 1,645,071 + Dsui_1572 0.45 +1.0 1,645,129 - Dsui_1572 0.59 +1.0 1,645,186 + Dsui_1572 0.73 +1.2 1,645,194 - +1.2 1,645,216 - Dsui_1572 0.80 +0.9 1,645,408 + +0.5 1,646,174 - +1.2 1,646,236 + -0.3 1,646,254 + +0.8
Or see this region's nucleotide sequence