Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1439 and Dsui_1440 are separated by 4 nucleotides Dsui_1440 and Dsui_1441 are separated by 157 nucleotides Dsui_1441 and Dsui_1442 are separated by 154 nucleotides
Dsui_1439: Dsui_1439 - methyl-accepting chemotaxis protein, at 1,493,420 to 1,494,691
_1439
Dsui_1440: Dsui_1440 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 1,494,696 to 1,495,061
_1440
Dsui_1441: Dsui_1441 - phenylacetate-CoA ligase, at 1,495,219 to 1,496,523
_1441
Dsui_1442: Dsui_1442 - putative efflux protein, MATE family, at 1,496,678 to 1,498,042
_1442
Position (kb)
1495
1496
1497 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1494.328 kb on + strand, within Dsui_1439 at 1494.411 kb on + strand, within Dsui_1439 at 1494.450 kb on - strand, within Dsui_1439 at 1494.552 kb on + strand, within Dsui_1439 at 1494.557 kb on + strand, within Dsui_1439 at 1494.880 kb on - strand, within Dsui_1440 at 1494.896 kb on + strand, within Dsui_1440 at 1494.902 kb on + strand, within Dsui_1440 at 1494.907 kb on + strand, within Dsui_1440 at 1494.917 kb on + strand, within Dsui_1440 at 1494.931 kb on - strand, within Dsui_1440 at 1494.943 kb on - strand, within Dsui_1440 at 1495.027 kb on - strand at 1495.054 kb on - strand at 1495.104 kb on + strand at 1495.110 kb on + strand at 1495.155 kb on - strand at 1495.167 kb on - strand at 1495.230 kb on - strand at 1495.244 kb on + strand at 1495.297 kb on - strand at 1495.319 kb on + strand at 1495.394 kb on + strand, within Dsui_1441 at 1495.587 kb on - strand, within Dsui_1441 at 1495.816 kb on - strand, within Dsui_1441 at 1495.868 kb on + strand at 1495.912 kb on - strand, within Dsui_1441 at 1495.956 kb on + strand at 1495.957 kb on - strand, within Dsui_1441 at 1495.960 kb on + strand at 1496.051 kb on + strand at 1496.056 kb on + strand, within Dsui_1441 at 1496.077 kb on - strand, within Dsui_1441 at 1496.168 kb on + strand at 1496.331 kb on - strand, within Dsui_1441 at 1496.346 kb on + strand, within Dsui_1441 at 1496.435 kb on + strand at 1496.572 kb on + strand at 1496.667 kb on - strand at 1496.799 kb on + strand at 1497.000 kb on - strand, within Dsui_1442 at 1497.035 kb on - strand, within Dsui_1442 at 1497.113 kb on - strand at 1497.130 kb on + strand, within Dsui_1442 at 1497.135 kb on - strand at 1497.159 kb on - strand at 1497.430 kb on + strand, within Dsui_1442 at 1497.465 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,494,328 + Dsui_1439 0.71 +0.8 1,494,411 + Dsui_1439 0.78 +1.6 1,494,450 - Dsui_1439 0.81 -0.5 1,494,552 + Dsui_1439 0.89 +0.7 1,494,557 + Dsui_1439 0.89 +0.6 1,494,880 - Dsui_1440 0.50 +0.5 1,494,896 + Dsui_1440 0.55 +0.4 1,494,902 + Dsui_1440 0.56 +0.4 1,494,907 + Dsui_1440 0.58 +0.1 1,494,917 + Dsui_1440 0.60 +0.4 1,494,931 - Dsui_1440 0.64 +1.9 1,494,943 - Dsui_1440 0.67 +0.5 1,495,027 - -0.4 1,495,054 - +0.7 1,495,104 + +0.6 1,495,110 + -1.1 1,495,155 - -1.1 1,495,167 - +1.2 1,495,230 - +0.7 1,495,244 + -0.9 1,495,297 - +1.2 1,495,319 + +0.0 1,495,394 + Dsui_1441 0.13 +0.5 1,495,587 - Dsui_1441 0.28 +1.0 1,495,816 - Dsui_1441 0.46 +0.4 1,495,868 + -2.9 1,495,912 - Dsui_1441 0.53 +0.5 1,495,956 + +0.0 1,495,957 - Dsui_1441 0.57 +0.7 1,495,960 + +0.6 1,496,051 + -0.4 1,496,056 + Dsui_1441 0.64 -0.5 1,496,077 - Dsui_1441 0.66 +0.4 1,496,168 + -2.6 1,496,331 - Dsui_1441 0.85 +1.1 1,496,346 + Dsui_1441 0.86 +0.3 1,496,435 + +1.1 1,496,572 + -0.8 1,496,667 - -0.1 1,496,799 + -3.4 1,497,000 - Dsui_1442 0.24 -1.1 1,497,035 - Dsui_1442 0.26 -1.9 1,497,113 - -1.3 1,497,130 + Dsui_1442 0.33 +0.7 1,497,135 - +0.3 1,497,159 - +1.0 1,497,430 + Dsui_1442 0.55 -0.0 1,497,465 + +0.7
Or see this region's nucleotide sequence