Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1320 and Dsui_1321 are separated by 275 nucleotides Dsui_1321 and Dsui_1322 are separated by 45 nucleotides
Dsui_1320: Dsui_1320 - type IV-A pilus assembly ATPase PilB, at 1,378,521 to 1,380,239
_1320
Dsui_1321: Dsui_1321 - ABC-type uncharacterized transport system, permease component, at 1,380,515 to 1,381,354
_1321
Dsui_1322: Dsui_1322 - signal recognition particle protein, at 1,381,400 to 1,382,755
_1322
Position (kb)
1380
1381
1382 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1379.681 kb on - strand, within Dsui_1320 at 1379.688 kb on - strand, within Dsui_1320 at 1379.704 kb on - strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.719 kb on + strand, within Dsui_1320 at 1379.732 kb on - strand, within Dsui_1320 at 1379.762 kb on - strand, within Dsui_1320 at 1379.762 kb on - strand, within Dsui_1320 at 1379.853 kb on + strand, within Dsui_1320 at 1379.866 kb on - strand, within Dsui_1320 at 1379.978 kb on + strand, within Dsui_1320 at 1380.087 kb on + strand at 1380.146 kb on - strand at 1380.160 kb on + strand at 1380.161 kb on - strand at 1380.167 kb on - strand at 1380.178 kb on + strand at 1380.178 kb on - strand at 1380.184 kb on + strand at 1380.184 kb on + strand at 1380.186 kb on - strand at 1380.192 kb on - strand at 1380.210 kb on + strand at 1380.218 kb on - strand at 1380.250 kb on - strand at 1380.257 kb on + strand at 1380.372 kb on - strand at 1380.381 kb on + strand at 1380.389 kb on - strand at 1380.466 kb on - strand at 1380.466 kb on - strand at 1380.466 kb on - strand at 1380.599 kb on + strand, within Dsui_1321 at 1380.599 kb on + strand, within Dsui_1321 at 1380.774 kb on - strand, within Dsui_1321 at 1380.990 kb on - strand, within Dsui_1321 at 1381.038 kb on + strand, within Dsui_1321 at 1381.116 kb on - strand, within Dsui_1321 at 1381.116 kb on - strand, within Dsui_1321 at 1381.128 kb on - strand, within Dsui_1321
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,379,681 - Dsui_1320 0.67 +0.5 1,379,688 - Dsui_1320 0.68 -0.0 1,379,704 - Dsui_1320 0.69 +0.4 1,379,719 + Dsui_1320 0.70 +0.8 1,379,719 + Dsui_1320 0.70 +2.2 1,379,719 + Dsui_1320 0.70 +0.3 1,379,719 + Dsui_1320 0.70 -0.6 1,379,732 - Dsui_1320 0.70 +0.4 1,379,762 - Dsui_1320 0.72 +0.9 1,379,762 - Dsui_1320 0.72 +0.5 1,379,853 + Dsui_1320 0.77 -0.8 1,379,866 - Dsui_1320 0.78 +0.3 1,379,978 + Dsui_1320 0.85 -0.7 1,380,087 + +0.2 1,380,146 - -0.1 1,380,160 + +0.3 1,380,161 - +0.4 1,380,167 - +0.7 1,380,178 + -0.4 1,380,178 - +1.0 1,380,184 + -0.8 1,380,184 + -0.6 1,380,186 - +0.5 1,380,192 - +0.9 1,380,210 + +2.3 1,380,218 - +0.6 1,380,250 - +0.9 1,380,257 + -0.5 1,380,372 - +0.4 1,380,381 + -0.3 1,380,389 - +0.7 1,380,466 - +0.4 1,380,466 - -0.1 1,380,466 - +0.6 1,380,599 + Dsui_1321 0.10 -2.7 1,380,599 + Dsui_1321 0.10 -3.1 1,380,774 - Dsui_1321 0.31 -4.9 1,380,990 - Dsui_1321 0.57 -4.3 1,381,038 + Dsui_1321 0.62 -2.6 1,381,116 - Dsui_1321 0.72 -1.8 1,381,116 - Dsui_1321 0.72 -3.0 1,381,128 - Dsui_1321 0.73 -5.7
Or see this region's nucleotide sequence