Strain Fitness in Dechlorosoma suillum PS around Dsui_1061

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1059 and Dsui_1060 overlap by 4 nucleotidesDsui_1060 and Dsui_1061 are separated by 60 nucleotidesDsui_1061 and Dsui_1062 are separated by 182 nucleotides Dsui_1059: Dsui_1059 - thiamine monophosphate synthase, at 1,091,606 to 1,092,553 _1059 Dsui_1060: Dsui_1060 - putative ATPase (AAA+ superfamily), at 1,092,550 to 1,093,473 _1060 Dsui_1061: Dsui_1061 - membrane-bound lytic murein transglycosylase, at 1,093,534 to 1,094,772 _1061 Dsui_1062: Dsui_1062 - ammonia permease, at 1,094,955 to 1,096,160 _1062 Position (kb) 1093 1094 1095Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1092.561 kb on + strandat 1093.045 kb on - strand, within Dsui_1060at 1093.047 kb on - strand, within Dsui_1060at 1093.115 kb on + strandat 1093.123 kb on - strand, within Dsui_1060at 1093.272 kb on - strand, within Dsui_1060at 1093.345 kb on - strand, within Dsui_1060at 1093.367 kb on - strand, within Dsui_1060at 1093.372 kb on - strand, within Dsui_1060at 1093.471 kb on - strandat 1093.476 kb on - strandat 1093.477 kb on - strandat 1093.481 kb on + strandat 1093.481 kb on + strandat 1093.518 kb on - strandat 1093.741 kb on + strand, within Dsui_1061at 1093.882 kb on + strand, within Dsui_1061at 1094.029 kb on + strand, within Dsui_1061at 1094.053 kb on + strand, within Dsui_1061at 1094.055 kb on + strand, within Dsui_1061at 1094.063 kb on - strand, within Dsui_1061at 1094.068 kb on - strand, within Dsui_1061at 1094.192 kb on - strand, within Dsui_1061at 1094.327 kb on + strand, within Dsui_1061at 1094.427 kb on + strand, within Dsui_1061at 1094.586 kb on - strand, within Dsui_1061at 1094.615 kb on + strand, within Dsui_1061at 1094.753 kb on - strandat 1094.756 kb on + strandat 1094.883 kb on - strandat 1094.896 kb on + strandat 1095.004 kb on + strandat 1095.004 kb on + strandat 1095.012 kb on - strandat 1095.040 kb on + strandat 1095.048 kb on - strandat 1095.072 kb on - strandat 1095.074 kb on + strandat 1095.074 kb on + strandat 1095.074 kb on + strandat 1095.082 kb on - strand, within Dsui_1062at 1095.086 kb on + strand, within Dsui_1062at 1095.104 kb on - strand, within Dsui_1062at 1095.120 kb on - strand, within Dsui_1062at 1095.357 kb on + strand, within Dsui_1062at 1095.365 kb on - strand, within Dsui_1062at 1095.480 kb on + strand, within Dsui_1062at 1095.567 kb on - strand, within Dsui_1062at 1095.574 kb on + strand, within Dsui_1062at 1095.659 kb on - strand, within Dsui_1062at 1095.667 kb on + strand, within Dsui_1062at 1095.699 kb on + strand, within Dsui_1062at 1095.704 kb on + strand, within Dsui_1062at 1095.769 kb on + strand, within Dsui_1062

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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1,092,561 + -0.1
1,093,045 - Dsui_1060 0.54 +0.3
1,093,047 - Dsui_1060 0.54 +0.6
1,093,115 + -0.6
1,093,123 - Dsui_1060 0.62 -0.2
1,093,272 - Dsui_1060 0.78 +1.2
1,093,345 - Dsui_1060 0.86 +0.4
1,093,367 - Dsui_1060 0.88 -2.2
1,093,372 - Dsui_1060 0.89 +0.6
1,093,471 - +0.3
1,093,476 - +0.6
1,093,477 - -1.0
1,093,481 + +0.1
1,093,481 + +2.7
1,093,518 - +0.1
1,093,741 + Dsui_1061 0.17 -3.1
1,093,882 + Dsui_1061 0.28 -1.4
1,094,029 + Dsui_1061 0.40 -1.8
1,094,053 + Dsui_1061 0.42 -1.8
1,094,055 + Dsui_1061 0.42 -0.3
1,094,063 - Dsui_1061 0.43 -3.0
1,094,068 - Dsui_1061 0.43 -1.4
1,094,192 - Dsui_1061 0.53 -1.3
1,094,327 + Dsui_1061 0.64 -1.4
1,094,427 + Dsui_1061 0.72 -1.5
1,094,586 - Dsui_1061 0.85 -1.7
1,094,615 + Dsui_1061 0.87 -1.0
1,094,753 - -0.9
1,094,756 + +0.2
1,094,883 - +1.0
1,094,896 + +1.2
1,095,004 + +0.4
1,095,004 + +0.4
1,095,012 - +0.4
1,095,040 + +1.7
1,095,048 - -0.2
1,095,072 - -0.1
1,095,074 + +0.4
1,095,074 + +0.8
1,095,074 + -1.6
1,095,082 - Dsui_1062 0.11 -0.4
1,095,086 + Dsui_1062 0.11 +0.9
1,095,104 - Dsui_1062 0.12 -0.3
1,095,120 - Dsui_1062 0.14 -1.4
1,095,357 + Dsui_1062 0.33 -1.2
1,095,365 - Dsui_1062 0.34 -0.2
1,095,480 + Dsui_1062 0.44 +0.1
1,095,567 - Dsui_1062 0.51 -0.3
1,095,574 + Dsui_1062 0.51 +0.0
1,095,659 - Dsui_1062 0.58 +0.7
1,095,667 + Dsui_1062 0.59 +0.4
1,095,699 + Dsui_1062 0.62 +1.2
1,095,704 + Dsui_1062 0.62 +0.0
1,095,769 + Dsui_1062 0.67 -0.8

Or see this region's nucleotide sequence