Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1059 and Dsui_1060 overlap by 4 nucleotides Dsui_1060 and Dsui_1061 are separated by 60 nucleotides Dsui_1061 and Dsui_1062 are separated by 182 nucleotides
Dsui_1059: Dsui_1059 - thiamine monophosphate synthase, at 1,091,606 to 1,092,553
_1059
Dsui_1060: Dsui_1060 - putative ATPase (AAA+ superfamily), at 1,092,550 to 1,093,473
_1060
Dsui_1061: Dsui_1061 - membrane-bound lytic murein transglycosylase, at 1,093,534 to 1,094,772
_1061
Dsui_1062: Dsui_1062 - ammonia permease, at 1,094,955 to 1,096,160
_1062
Position (kb)
1093
1094
1095 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1092.561 kb on + strand at 1093.045 kb on - strand, within Dsui_1060 at 1093.047 kb on - strand, within Dsui_1060 at 1093.115 kb on + strand at 1093.123 kb on - strand, within Dsui_1060 at 1093.272 kb on - strand, within Dsui_1060 at 1093.345 kb on - strand, within Dsui_1060 at 1093.367 kb on - strand, within Dsui_1060 at 1093.372 kb on - strand, within Dsui_1060 at 1093.471 kb on - strand at 1093.476 kb on - strand at 1093.477 kb on - strand at 1093.481 kb on + strand at 1093.481 kb on + strand at 1093.518 kb on - strand at 1093.741 kb on + strand, within Dsui_1061 at 1093.882 kb on + strand, within Dsui_1061 at 1094.029 kb on + strand, within Dsui_1061 at 1094.053 kb on + strand, within Dsui_1061 at 1094.055 kb on + strand, within Dsui_1061 at 1094.063 kb on - strand, within Dsui_1061 at 1094.068 kb on - strand, within Dsui_1061 at 1094.192 kb on - strand, within Dsui_1061 at 1094.327 kb on + strand, within Dsui_1061 at 1094.427 kb on + strand, within Dsui_1061 at 1094.586 kb on - strand, within Dsui_1061 at 1094.615 kb on + strand, within Dsui_1061 at 1094.753 kb on - strand at 1094.756 kb on + strand at 1094.883 kb on - strand at 1094.896 kb on + strand at 1095.004 kb on + strand at 1095.004 kb on + strand at 1095.012 kb on - strand at 1095.040 kb on + strand at 1095.048 kb on - strand at 1095.072 kb on - strand at 1095.074 kb on + strand at 1095.074 kb on + strand at 1095.074 kb on + strand at 1095.082 kb on - strand, within Dsui_1062 at 1095.086 kb on + strand, within Dsui_1062 at 1095.104 kb on - strand, within Dsui_1062 at 1095.120 kb on - strand, within Dsui_1062 at 1095.357 kb on + strand, within Dsui_1062 at 1095.365 kb on - strand, within Dsui_1062 at 1095.480 kb on + strand, within Dsui_1062 at 1095.567 kb on - strand, within Dsui_1062 at 1095.574 kb on + strand, within Dsui_1062 at 1095.659 kb on - strand, within Dsui_1062 at 1095.667 kb on + strand, within Dsui_1062 at 1095.699 kb on + strand, within Dsui_1062 at 1095.704 kb on + strand, within Dsui_1062 at 1095.769 kb on + strand, within Dsui_1062
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,092,561 + -0.1 1,093,045 - Dsui_1060 0.54 +0.3 1,093,047 - Dsui_1060 0.54 +0.6 1,093,115 + -0.6 1,093,123 - Dsui_1060 0.62 -0.2 1,093,272 - Dsui_1060 0.78 +1.2 1,093,345 - Dsui_1060 0.86 +0.4 1,093,367 - Dsui_1060 0.88 -2.2 1,093,372 - Dsui_1060 0.89 +0.6 1,093,471 - +0.3 1,093,476 - +0.6 1,093,477 - -1.0 1,093,481 + +0.1 1,093,481 + +2.7 1,093,518 - +0.1 1,093,741 + Dsui_1061 0.17 -3.1 1,093,882 + Dsui_1061 0.28 -1.4 1,094,029 + Dsui_1061 0.40 -1.8 1,094,053 + Dsui_1061 0.42 -1.8 1,094,055 + Dsui_1061 0.42 -0.3 1,094,063 - Dsui_1061 0.43 -3.0 1,094,068 - Dsui_1061 0.43 -1.4 1,094,192 - Dsui_1061 0.53 -1.3 1,094,327 + Dsui_1061 0.64 -1.4 1,094,427 + Dsui_1061 0.72 -1.5 1,094,586 - Dsui_1061 0.85 -1.7 1,094,615 + Dsui_1061 0.87 -1.0 1,094,753 - -0.9 1,094,756 + +0.2 1,094,883 - +1.0 1,094,896 + +1.2 1,095,004 + +0.4 1,095,004 + +0.4 1,095,012 - +0.4 1,095,040 + +1.7 1,095,048 - -0.2 1,095,072 - -0.1 1,095,074 + +0.4 1,095,074 + +0.8 1,095,074 + -1.6 1,095,082 - Dsui_1062 0.11 -0.4 1,095,086 + Dsui_1062 0.11 +0.9 1,095,104 - Dsui_1062 0.12 -0.3 1,095,120 - Dsui_1062 0.14 -1.4 1,095,357 + Dsui_1062 0.33 -1.2 1,095,365 - Dsui_1062 0.34 -0.2 1,095,480 + Dsui_1062 0.44 +0.1 1,095,567 - Dsui_1062 0.51 -0.3 1,095,574 + Dsui_1062 0.51 +0.0 1,095,659 - Dsui_1062 0.58 +0.7 1,095,667 + Dsui_1062 0.59 +0.4 1,095,699 + Dsui_1062 0.62 +1.2 1,095,704 + Dsui_1062 0.62 +0.0 1,095,769 + Dsui_1062 0.67 -0.8
Or see this region's nucleotide sequence