Strain Fitness in Dechlorosoma suillum PS around Dsui_1016

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1015 and Dsui_1016 are separated by 17 nucleotides Dsui_1015: Dsui_1015 - hypothetical protein, at 1,047,260 to 1,048,507 _1015 Dsui_1016: Dsui_1016 - tRNA (guanine-N(7)-)-methyltransferase, at 1,048,525 to 1,049,280 _1016 Position (kb) 1048 1049 1050Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 1047.624 kb on - strand, within Dsui_1015at 1047.872 kb on - strandat 1047.892 kb on + strand, within Dsui_1015at 1047.957 kb on + strand, within Dsui_1015at 1048.102 kb on + strand, within Dsui_1015at 1048.264 kb on + strand, within Dsui_1015at 1048.338 kb on + strand, within Dsui_1015at 1048.443 kb on - strandat 1048.471 kb on + strandat 1048.546 kb on + strandat 1048.571 kb on - strandat 1048.571 kb on - strandat 1048.580 kb on + strandat 1048.603 kb on + strand, within Dsui_1016at 1048.847 kb on + strand, within Dsui_1016at 1048.855 kb on - strand, within Dsui_1016at 1048.890 kb on + strand, within Dsui_1016at 1049.029 kb on - strand, within Dsui_1016at 1049.224 kb on - strandat 1049.248 kb on + strandat 1049.251 kb on - strandat 1049.386 kb on + strandat 1049.386 kb on + strandat 1049.386 kb on + strandat 1049.394 kb on + strandat 1049.394 kb on - strandat 1049.434 kb on + strandat 1049.434 kb on - strandat 1049.472 kb on - strandat 1049.499 kb on - strandat 1049.654 kb on + strandat 1049.664 kb on - strandat 1049.674 kb on + strandat 1049.674 kb on + strandat 1049.674 kb on + strandat 1049.674 kb on + strandat 1049.674 kb on + strandat 1049.674 kb on + strandat 1049.674 kb on - strandat 1049.681 kb on + strandat 1049.682 kb on + strandat 1049.682 kb on - strandat 1049.682 kb on - strandat 1049.682 kb on - strandat 1049.702 kb on - strandat 1049.714 kb on - strandat 1049.724 kb on + strandat 1049.737 kb on + strandat 1049.750 kb on + strandat 1049.758 kb on - strandat 1049.763 kb on + strandat 1049.763 kb on + strandat 1049.783 kb on - strandat 1049.808 kb on + strandat 1049.808 kb on + strandat 1049.808 kb on + strandat 1049.809 kb on + strandat 1049.816 kb on - strandat 1049.816 kb on - strandat 1049.816 kb on - strandat 1049.818 kb on + strandat 1049.828 kb on + strandat 1049.894 kb on + strandat 1049.894 kb on + strandat 1049.899 kb on + strandat 1049.907 kb on - strandat 1049.934 kb on + strandat 1049.942 kb on - strandat 1049.958 kb on + strandat 1049.958 kb on + strandat 1049.966 kb on + strandat 1049.974 kb on - strandat 1050.033 kb on - strandat 1050.033 kb on - strandat 1050.046 kb on + strandat 1050.046 kb on + strandat 1050.046 kb on + strandat 1050.046 kb on + strandat 1050.048 kb on + strandat 1050.053 kb on + strandat 1050.054 kb on - strandat 1050.061 kb on - strandat 1050.085 kb on + strandat 1050.091 kb on - strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on + strandat 1050.093 kb on - strandat 1050.099 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.101 kb on - strandat 1050.102 kb on + strandat 1050.108 kb on - strandat 1050.114 kb on + strandat 1050.121 kb on + strandat 1050.123 kb on + strandat 1050.131 kb on - strandat 1050.145 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.183 kb on + strandat 1050.190 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.191 kb on - strandat 1050.210 kb on + strandat 1050.210 kb on + strandat 1050.216 kb on + strandat 1050.225 kb on + strandat 1050.226 kb on + strandat 1050.233 kb on - strandat 1050.234 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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1,047,624 - Dsui_1015 0.29 -4.8
1,047,872 - -2.1
1,047,892 + Dsui_1015 0.51 -5.0
1,047,957 + Dsui_1015 0.56 -4.8
1,048,102 + Dsui_1015 0.67 -4.3
1,048,264 + Dsui_1015 0.80 -1.1
1,048,338 + Dsui_1015 0.86 -1.8
1,048,443 - -0.3
1,048,471 + -1.2
1,048,546 + +0.6
1,048,571 - -0.0
1,048,571 - +0.1
1,048,580 + -2.2
1,048,603 + Dsui_1016 0.10 -0.9
1,048,847 + Dsui_1016 0.43 -3.9
1,048,855 - Dsui_1016 0.44 -3.1
1,048,890 + Dsui_1016 0.48 -1.2
1,049,029 - Dsui_1016 0.67 -2.7
1,049,224 - -2.5
1,049,248 + -1.8
1,049,251 - -2.7
1,049,386 + +1.0
1,049,386 + +0.6
1,049,386 + -1.3
1,049,394 + +0.3
1,049,394 - -0.1
1,049,434 + -0.2
1,049,434 - -0.2
1,049,472 - +1.0
1,049,499 - +0.7
1,049,654 + +0.8
1,049,664 - +2.8
1,049,674 + +0.9
1,049,674 + +0.1
1,049,674 + +0.6
1,049,674 + +0.9
1,049,674 + -0.4
1,049,674 + +0.9
1,049,674 - +1.8
1,049,681 + +1.4
1,049,682 + +0.7
1,049,682 - -0.1
1,049,682 - +0.2
1,049,682 - +0.6
1,049,702 - -1.0
1,049,714 - +0.3
1,049,724 + +0.2
1,049,737 + +0.4
1,049,750 + +0.1
1,049,758 - -1.5
1,049,763 + -1.2
1,049,763 + +0.7
1,049,783 - +2.7
1,049,808 + +0.4
1,049,808 + -0.1
1,049,808 + +0.4
1,049,809 + +0.8
1,049,816 - -0.9
1,049,816 - -0.2
1,049,816 - +0.2
1,049,818 + +0.1
1,049,828 + +0.5
1,049,894 + +0.1
1,049,894 + +0.3
1,049,899 + +0.4
1,049,907 - -2.2
1,049,934 + +0.8
1,049,942 - -1.3
1,049,958 + +3.3
1,049,958 + +1.2
1,049,966 + +0.5
1,049,974 - -1.0
1,050,033 - +0.2
1,050,033 - -1.0
1,050,046 + +0.6
1,050,046 + -0.3
1,050,046 + +0.8
1,050,046 + -1.7
1,050,048 + +0.3
1,050,053 + +1.8
1,050,054 - -1.2
1,050,061 - +1.2
1,050,085 + +0.5
1,050,091 - -2.6
1,050,093 + +0.5
1,050,093 + +2.4
1,050,093 + +0.9
1,050,093 + -0.4
1,050,093 + +0.9
1,050,093 + +0.1
1,050,093 + +0.6
1,050,093 + +0.6
1,050,093 + -0.0
1,050,093 + +0.9
1,050,093 + +1.2
1,050,093 + +1.2
1,050,093 - +0.3
1,050,099 - -0.3
1,050,101 - +0.5
1,050,101 - +0.6
1,050,101 - -0.5
1,050,101 - -1.8
1,050,101 - -0.1
1,050,101 - +0.3
1,050,101 - +0.5
1,050,101 - -0.1
1,050,101 - +0.1
1,050,101 - +1.3
1,050,101 - -0.4
1,050,101 - -0.1
1,050,101 - -2.6
1,050,101 - -3.2
1,050,101 - -3.2
1,050,101 - -1.5
1,050,101 - +0.6
1,050,101 - -2.6
1,050,101 - -0.3
1,050,101 - +0.1
1,050,101 - +0.8
1,050,102 + +1.3
1,050,108 - -0.1
1,050,114 + +0.6
1,050,121 + +0.3
1,050,123 + -0.3
1,050,131 - -1.1
1,050,145 + +0.8
1,050,183 + +0.3
1,050,183 + +0.1
1,050,183 + -2.6
1,050,183 + +0.3
1,050,183 + +0.5
1,050,183 + +0.1
1,050,183 + +0.3
1,050,183 + +0.0
1,050,183 + +0.7
1,050,183 + -0.1
1,050,183 + +0.2
1,050,190 - +0.8
1,050,191 - -0.6
1,050,191 - -0.5
1,050,191 - -1.3
1,050,191 - -3.2
1,050,191 - +0.8
1,050,191 - +0.5
1,050,191 - -2.9
1,050,191 - +0.3
1,050,191 - -0.5
1,050,191 - -3.2
1,050,191 - +1.0
1,050,191 - -4.3
1,050,191 - -0.0
1,050,191 - +0.8
1,050,191 - -0.6
1,050,191 - -0.7
1,050,191 - -0.7
1,050,210 + -1.5
1,050,210 + +0.6
1,050,216 + +1.2
1,050,225 + +0.7
1,050,226 + +1.1
1,050,233 - -0.1
1,050,234 - -4.0

Or see this region's nucleotide sequence