Strain Fitness in Dechlorosoma suillum PS around Dsui_1015

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1013 and Dsui_1014 are separated by 69 nucleotidesDsui_1014 and Dsui_1015 are separated by 2 nucleotidesDsui_1015 and Dsui_1016 are separated by 17 nucleotides Dsui_1013: Dsui_1013 - thiamine biosynthesis protein ThiS, at 1,046,193 to 1,046,402 _1013 Dsui_1014: Dsui_1014 - putative enzyme of thiazole biosynthesis, at 1,046,472 to 1,047,257 _1014 Dsui_1015: Dsui_1015 - hypothetical protein, at 1,047,260 to 1,048,507 _1015 Dsui_1016: Dsui_1016 - tRNA (guanine-N(7)-)-methyltransferase, at 1,048,525 to 1,049,280 _1016 Position (kb) 1047 1048 1049Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1047.308 kb on - strandat 1047.343 kb on + strandat 1047.410 kb on + strand, within Dsui_1015at 1047.459 kb on - strand, within Dsui_1015at 1047.484 kb on + strand, within Dsui_1015at 1047.624 kb on - strand, within Dsui_1015at 1047.872 kb on - strandat 1047.892 kb on + strand, within Dsui_1015at 1047.957 kb on + strand, within Dsui_1015at 1048.102 kb on + strand, within Dsui_1015at 1048.264 kb on + strand, within Dsui_1015at 1048.338 kb on + strand, within Dsui_1015at 1048.443 kb on - strandat 1048.471 kb on + strandat 1048.546 kb on + strandat 1048.571 kb on - strandat 1048.571 kb on - strandat 1048.580 kb on + strandat 1048.603 kb on + strand, within Dsui_1016at 1048.847 kb on + strand, within Dsui_1016at 1048.855 kb on - strand, within Dsui_1016at 1048.890 kb on + strand, within Dsui_1016at 1049.029 kb on - strand, within Dsui_1016at 1049.224 kb on - strandat 1049.248 kb on + strandat 1049.251 kb on - strandat 1049.386 kb on + strandat 1049.386 kb on + strandat 1049.386 kb on + strandat 1049.394 kb on + strandat 1049.394 kb on - strandat 1049.434 kb on + strandat 1049.434 kb on - strandat 1049.472 kb on - strandat 1049.499 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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1,047,308 - -2.1
1,047,343 + -4.9
1,047,410 + Dsui_1015 0.12 -2.5
1,047,459 - Dsui_1015 0.16 -3.3
1,047,484 + Dsui_1015 0.18 -3.7
1,047,624 - Dsui_1015 0.29 -4.8
1,047,872 - -2.1
1,047,892 + Dsui_1015 0.51 -5.0
1,047,957 + Dsui_1015 0.56 -4.8
1,048,102 + Dsui_1015 0.67 -4.3
1,048,264 + Dsui_1015 0.80 -1.1
1,048,338 + Dsui_1015 0.86 -1.8
1,048,443 - -0.3
1,048,471 + -1.2
1,048,546 + +0.6
1,048,571 - -0.0
1,048,571 - +0.1
1,048,580 + -2.2
1,048,603 + Dsui_1016 0.10 -0.9
1,048,847 + Dsui_1016 0.43 -3.9
1,048,855 - Dsui_1016 0.44 -3.1
1,048,890 + Dsui_1016 0.48 -1.2
1,049,029 - Dsui_1016 0.67 -2.7
1,049,224 - -2.5
1,049,248 + -1.8
1,049,251 - -2.7
1,049,386 + +1.0
1,049,386 + +0.6
1,049,386 + -1.3
1,049,394 + +0.3
1,049,394 - -0.1
1,049,434 + -0.2
1,049,434 - -0.2
1,049,472 - +1.0
1,049,499 - +0.7

Or see this region's nucleotide sequence