Strain Fitness in Dechlorosoma suillum PS around Dsui_0808

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0807 and Dsui_0808 are separated by 10 nucleotidesDsui_0808 and Dsui_0809 are separated by 116 nucleotides Dsui_0807: Dsui_0807 - Trk-type K+ transport system, membrane component, at 816,371 to 817,828 _0807 Dsui_0808: Dsui_0808 - K+ transport system, NAD-binding component, at 817,839 to 819,269 _0808 Dsui_0809: Dsui_0809 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 819,386 to 820,642 _0809 Position (kb) 817 818 819 820Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 816.849 kb on + strand, within Dsui_0807at 816.856 kb on - strand, within Dsui_0807at 816.857 kb on - strand, within Dsui_0807at 816.857 kb on - strand, within Dsui_0807at 816.861 kb on - strand, within Dsui_0807at 816.864 kb on + strandat 816.876 kb on - strand, within Dsui_0807at 816.906 kb on + strand, within Dsui_0807at 816.911 kb on + strand, within Dsui_0807at 816.914 kb on - strand, within Dsui_0807at 816.914 kb on - strand, within Dsui_0807at 816.914 kb on - strand, within Dsui_0807at 816.919 kb on - strand, within Dsui_0807at 816.929 kb on - strand, within Dsui_0807at 816.932 kb on + strand, within Dsui_0807at 816.963 kb on - strand, within Dsui_0807at 817.017 kb on - strand, within Dsui_0807at 817.036 kb on + strand, within Dsui_0807at 817.038 kb on - strand, within Dsui_0807at 817.066 kb on - strand, within Dsui_0807at 817.080 kb on + strand, within Dsui_0807at 817.080 kb on + strand, within Dsui_0807at 817.081 kb on - strand, within Dsui_0807at 817.085 kb on + strand, within Dsui_0807at 817.085 kb on - strandat 817.098 kb on - strand, within Dsui_0807at 817.125 kb on + strand, within Dsui_0807at 817.141 kb on + strand, within Dsui_0807at 817.171 kb on + strand, within Dsui_0807at 817.179 kb on - strand, within Dsui_0807at 817.179 kb on - strand, within Dsui_0807at 817.179 kb on - strand, within Dsui_0807at 817.221 kb on + strand, within Dsui_0807at 817.229 kb on - strand, within Dsui_0807at 817.234 kb on - strand, within Dsui_0807at 817.261 kb on - strand, within Dsui_0807at 817.277 kb on - strand, within Dsui_0807at 817.279 kb on - strand, within Dsui_0807at 817.311 kb on - strand, within Dsui_0807at 817.341 kb on + strand, within Dsui_0807at 817.349 kb on - strand, within Dsui_0807at 817.349 kb on - strand, within Dsui_0807at 817.351 kb on + strand, within Dsui_0807at 817.413 kb on - strand, within Dsui_0807at 817.413 kb on - strand, within Dsui_0807at 817.414 kb on + strand, within Dsui_0807at 817.423 kb on + strand, within Dsui_0807at 817.426 kb on + strand, within Dsui_0807at 817.434 kb on - strand, within Dsui_0807at 817.465 kb on - strand, within Dsui_0807at 817.471 kb on + strand, within Dsui_0807at 817.504 kb on - strand, within Dsui_0807at 817.512 kb on - strand, within Dsui_0807at 817.512 kb on - strand, within Dsui_0807at 817.564 kb on + strand, within Dsui_0807at 817.578 kb on - strand, within Dsui_0807at 817.593 kb on + strand, within Dsui_0807at 817.596 kb on - strand, within Dsui_0807at 817.598 kb on + strand, within Dsui_0807at 817.598 kb on + strand, within Dsui_0807at 817.601 kb on - strand, within Dsui_0807at 817.606 kb on - strand, within Dsui_0807at 817.606 kb on - strand, within Dsui_0807at 817.606 kb on - strand, within Dsui_0807at 817.612 kb on + strand, within Dsui_0807at 817.685 kb on - strandat 817.708 kb on - strandat 817.725 kb on - strandat 817.733 kb on + strandat 817.755 kb on - strandat 817.799 kb on + strandat 817.800 kb on - strandat 817.800 kb on - strandat 817.806 kb on - strandat 817.812 kb on + strandat 817.820 kb on - strandat 817.820 kb on - strandat 817.820 kb on - strandat 817.838 kb on - strandat 817.949 kb on + strandat 817.964 kb on - strandat 817.972 kb on + strandat 818.050 kb on + strand, within Dsui_0808at 818.050 kb on + strand, within Dsui_0808at 818.050 kb on + strand, within Dsui_0808at 818.050 kb on + strand, within Dsui_0808at 818.050 kb on + strand, within Dsui_0808at 818.050 kb on + strand, within Dsui_0808at 818.050 kb on + strand, within Dsui_0808at 818.058 kb on - strand, within Dsui_0808at 818.058 kb on - strand, within Dsui_0808at 818.058 kb on - strand, within Dsui_0808at 818.058 kb on - strand, within Dsui_0808at 818.058 kb on - strand, within Dsui_0808at 818.058 kb on - strand, within Dsui_0808at 818.058 kb on - strand, within Dsui_0808at 818.068 kb on - strand, within Dsui_0808at 818.075 kb on + strand, within Dsui_0808at 818.163 kb on - strand, within Dsui_0808at 818.190 kb on + strand, within Dsui_0808at 818.198 kb on - strand, within Dsui_0808at 818.247 kb on + strand, within Dsui_0808at 818.247 kb on + strand, within Dsui_0808at 818.252 kb on + strand, within Dsui_0808at 818.255 kb on - strand, within Dsui_0808at 818.255 kb on - strand, within Dsui_0808at 818.271 kb on - strand, within Dsui_0808at 818.302 kb on + strand, within Dsui_0808at 818.360 kb on + strand, within Dsui_0808at 818.391 kb on + strand, within Dsui_0808at 818.394 kb on - strand, within Dsui_0808at 818.406 kb on + strand, within Dsui_0808at 818.411 kb on + strand, within Dsui_0808at 818.432 kb on + strand, within Dsui_0808at 818.432 kb on + strand, within Dsui_0808at 818.435 kb on - strand, within Dsui_0808at 818.440 kb on - strand, within Dsui_0808at 818.440 kb on - strand, within Dsui_0808at 818.440 kb on - strand, within Dsui_0808at 818.440 kb on - strand, within Dsui_0808at 818.443 kb on - strand, within Dsui_0808at 818.445 kb on + strand, within Dsui_0808at 818.458 kb on - strand, within Dsui_0808at 818.465 kb on + strand, within Dsui_0808at 818.511 kb on + strand, within Dsui_0808at 818.637 kb on + strand, within Dsui_0808at 818.656 kb on + strand, within Dsui_0808at 818.682 kb on - strand, within Dsui_0808at 818.840 kb on - strand, within Dsui_0808at 818.846 kb on - strand, within Dsui_0808at 818.884 kb on + strand, within Dsui_0808at 818.887 kb on - strand, within Dsui_0808at 818.892 kb on - strand, within Dsui_0808at 818.902 kb on - strand, within Dsui_0808at 818.935 kb on + strand, within Dsui_0808at 818.968 kb on + strand, within Dsui_0808at 819.076 kb on - strand, within Dsui_0808at 819.076 kb on - strand, within Dsui_0808at 819.076 kb on - strand, within Dsui_0808at 819.128 kb on - strandat 819.132 kb on + strandat 819.137 kb on + strandat 819.145 kb on - strandat 819.210 kb on - strandat 819.274 kb on + strandat 819.290 kb on - strandat 819.293 kb on + strandat 819.326 kb on - strandat 819.358 kb on + strandat 819.369 kb on + strandat 819.384 kb on + strandat 819.414 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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816,849 + Dsui_0807 0.33 -1.1
816,856 - Dsui_0807 0.33 +0.4
816,857 - Dsui_0807 0.33 +0.6
816,857 - Dsui_0807 0.33 +1.0
816,861 - Dsui_0807 0.34 -3.0
816,864 + +1.6
816,876 - Dsui_0807 0.35 +0.5
816,906 + Dsui_0807 0.37 +0.6
816,911 + Dsui_0807 0.37 +0.7
816,914 - Dsui_0807 0.37 +0.3
816,914 - Dsui_0807 0.37 -0.2
816,914 - Dsui_0807 0.37 -0.7
816,919 - Dsui_0807 0.38 -1.9
816,929 - Dsui_0807 0.38 +0.3
816,932 + Dsui_0807 0.38 +1.4
816,963 - Dsui_0807 0.41 +1.0
817,017 - Dsui_0807 0.44 +0.1
817,036 + Dsui_0807 0.46 +0.1
817,038 - Dsui_0807 0.46 +0.0
817,066 - Dsui_0807 0.48 -0.2
817,080 + Dsui_0807 0.49 +0.1
817,080 + Dsui_0807 0.49 -0.3
817,081 - Dsui_0807 0.49 -0.1
817,085 + Dsui_0807 0.49 +0.0
817,085 - -1.0
817,098 - Dsui_0807 0.50 +0.9
817,125 + Dsui_0807 0.52 +0.3
817,141 + Dsui_0807 0.53 -1.3
817,171 + Dsui_0807 0.55 +0.5
817,179 - Dsui_0807 0.55 +0.7
817,179 - Dsui_0807 0.55 +0.8
817,179 - Dsui_0807 0.55 +0.2
817,221 + Dsui_0807 0.58 -1.5
817,229 - Dsui_0807 0.59 +0.2
817,234 - Dsui_0807 0.59 -2.0
817,261 - Dsui_0807 0.61 -0.2
817,277 - Dsui_0807 0.62 -0.7
817,279 - Dsui_0807 0.62 -0.4
817,311 - Dsui_0807 0.64 +0.4
817,341 + Dsui_0807 0.67 +0.6
817,349 - Dsui_0807 0.67 +0.4
817,349 - Dsui_0807 0.67 +0.5
817,351 + Dsui_0807 0.67 +0.7
817,413 - Dsui_0807 0.71 +1.2
817,413 - Dsui_0807 0.71 +0.1
817,414 + Dsui_0807 0.72 -0.0
817,423 + Dsui_0807 0.72 -0.2
817,426 + Dsui_0807 0.72 +0.4
817,434 - Dsui_0807 0.73 -0.5
817,465 - Dsui_0807 0.75 -0.2
817,471 + Dsui_0807 0.75 +0.4
817,504 - Dsui_0807 0.78 +0.5
817,512 - Dsui_0807 0.78 -0.2
817,512 - Dsui_0807 0.78 -2.2
817,564 + Dsui_0807 0.82 +0.2
817,578 - Dsui_0807 0.83 +0.7
817,593 + Dsui_0807 0.84 +0.2
817,596 - Dsui_0807 0.84 +0.4
817,598 + Dsui_0807 0.84 -0.2
817,598 + Dsui_0807 0.84 +0.6
817,601 - Dsui_0807 0.84 +0.1
817,606 - Dsui_0807 0.85 +0.8
817,606 - Dsui_0807 0.85 +1.9
817,606 - Dsui_0807 0.85 +0.5
817,612 + Dsui_0807 0.85 +1.2
817,685 - -0.3
817,708 - +0.3
817,725 - +0.6
817,733 + +1.5
817,755 - -0.6
817,799 + -0.6
817,800 - +0.2
817,800 - +0.2
817,806 - +0.2
817,812 + -0.4
817,820 - +0.7
817,820 - -1.4
817,820 - +0.5
817,838 - +1.1
817,949 + +0.2
817,964 - -0.9
817,972 + +1.7
818,050 + Dsui_0808 0.15 -0.9
818,050 + Dsui_0808 0.15 -0.1
818,050 + Dsui_0808 0.15 +0.2
818,050 + Dsui_0808 0.15 +0.4
818,050 + Dsui_0808 0.15 +0.2
818,050 + Dsui_0808 0.15 -1.1
818,050 + Dsui_0808 0.15 +0.2
818,058 - Dsui_0808 0.15 +1.0
818,058 - Dsui_0808 0.15 -0.0
818,058 - Dsui_0808 0.15 +0.2
818,058 - Dsui_0808 0.15 +0.2
818,058 - Dsui_0808 0.15 +1.8
818,058 - Dsui_0808 0.15 -0.6
818,058 - Dsui_0808 0.15 +1.8
818,068 - Dsui_0808 0.16 +0.2
818,075 + Dsui_0808 0.16 -0.5
818,163 - Dsui_0808 0.23 +0.7
818,190 + Dsui_0808 0.25 -0.7
818,198 - Dsui_0808 0.25 +0.6
818,247 + Dsui_0808 0.29 +0.6
818,247 + Dsui_0808 0.29 +1.0
818,252 + Dsui_0808 0.29 +0.9
818,255 - Dsui_0808 0.29 +0.3
818,255 - Dsui_0808 0.29 +0.3
818,271 - Dsui_0808 0.30 +1.4
818,302 + Dsui_0808 0.32 -0.8
818,360 + Dsui_0808 0.36 -0.3
818,391 + Dsui_0808 0.39 +0.2
818,394 - Dsui_0808 0.39 -0.4
818,406 + Dsui_0808 0.40 +0.8
818,411 + Dsui_0808 0.40 +0.0
818,432 + Dsui_0808 0.41 +0.8
818,432 + Dsui_0808 0.41 +1.1
818,435 - Dsui_0808 0.42 +0.8
818,440 - Dsui_0808 0.42 -0.1
818,440 - Dsui_0808 0.42 +0.1
818,440 - Dsui_0808 0.42 +0.9
818,440 - Dsui_0808 0.42 -0.2
818,443 - Dsui_0808 0.42 -1.0
818,445 + Dsui_0808 0.42 +1.0
818,458 - Dsui_0808 0.43 +1.3
818,465 + Dsui_0808 0.44 +0.0
818,511 + Dsui_0808 0.47 +0.3
818,637 + Dsui_0808 0.56 +0.4
818,656 + Dsui_0808 0.57 -0.8
818,682 - Dsui_0808 0.59 +0.1
818,840 - Dsui_0808 0.70 +0.2
818,846 - Dsui_0808 0.70 -0.2
818,884 + Dsui_0808 0.73 +0.3
818,887 - Dsui_0808 0.73 +0.2
818,892 - Dsui_0808 0.74 +0.7
818,902 - Dsui_0808 0.74 +0.8
818,935 + Dsui_0808 0.77 +0.5
818,968 + Dsui_0808 0.79 +0.2
819,076 - Dsui_0808 0.86 -0.2
819,076 - Dsui_0808 0.86 +0.1
819,076 - Dsui_0808 0.86 -0.8
819,128 - +0.5
819,132 + +1.0
819,137 + +0.2
819,145 - -0.2
819,210 - -0.5
819,274 + +1.1
819,290 - +0.0
819,293 + +0.2
819,326 - +1.2
819,358 + +0.9
819,369 + +0.6
819,384 + +0.3
819,414 - -2.2

Or see this region's nucleotide sequence