Strain Fitness in Dechlorosoma suillum PS around Dsui_0698

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0697 and Dsui_0698 are separated by 21 nucleotidesDsui_0698 and Dsui_0699 are separated by 16 nucleotidesDsui_0699 and Dsui_0700 are separated by 121 nucleotides Dsui_0697: Dsui_0697 - protein kinase family protein, at 692,545 to 694,881 _0697 Dsui_0698: Dsui_0698 - hypothetical protein, at 694,903 to 695,718 _0698 Dsui_0699: Dsui_0699 - hypothetical protein, at 695,735 to 696,406 _0699 Dsui_0700: Dsui_0700 - psiF repeat protein, at 696,528 to 696,842 _0700 Position (kb) 694 695 696Strain fitness (log2 ratio) -3 -2 -1 0 1at 694.012 kb on - strand, within Dsui_0697at 694.204 kb on + strand, within Dsui_0697at 694.218 kb on + strand, within Dsui_0697at 694.249 kb on - strand, within Dsui_0697at 694.256 kb on - strand, within Dsui_0697at 694.284 kb on - strand, within Dsui_0697at 694.286 kb on + strandat 694.296 kb on + strand, within Dsui_0697at 694.322 kb on + strand, within Dsui_0697at 694.328 kb on - strand, within Dsui_0697at 694.332 kb on + strand, within Dsui_0697at 694.351 kb on - strand, within Dsui_0697at 694.370 kb on - strand, within Dsui_0697at 694.391 kb on - strand, within Dsui_0697at 694.421 kb on + strand, within Dsui_0697at 694.429 kb on - strand, within Dsui_0697at 694.501 kb on + strand, within Dsui_0697at 694.593 kb on - strand, within Dsui_0697at 694.620 kb on - strand, within Dsui_0697at 694.625 kb on + strand, within Dsui_0697at 694.638 kb on - strand, within Dsui_0697at 694.701 kb on + strandat 694.727 kb on - strandat 694.757 kb on + strandat 694.757 kb on + strandat 694.765 kb on - strandat 694.796 kb on - strandat 694.850 kb on - strandat 694.850 kb on - strandat 694.953 kb on + strandat 694.956 kb on - strandat 694.956 kb on - strandat 694.970 kb on - strandat 695.054 kb on + strand, within Dsui_0698at 695.062 kb on - strand, within Dsui_0698at 695.102 kb on + strand, within Dsui_0698at 695.115 kb on - strand, within Dsui_0698at 695.120 kb on - strand, within Dsui_0698at 695.173 kb on - strand, within Dsui_0698at 695.178 kb on - strand, within Dsui_0698at 695.273 kb on + strand, within Dsui_0698at 695.273 kb on + strand, within Dsui_0698at 695.281 kb on - strand, within Dsui_0698at 695.309 kb on + strand, within Dsui_0698at 695.353 kb on - strand, within Dsui_0698at 695.353 kb on - strand, within Dsui_0698at 695.363 kb on + strand, within Dsui_0698at 695.371 kb on - strand, within Dsui_0698at 695.439 kb on + strand, within Dsui_0698at 695.535 kb on - strand, within Dsui_0698at 695.552 kb on + strand, within Dsui_0698at 695.552 kb on + strand, within Dsui_0698at 695.583 kb on - strand, within Dsui_0698at 695.584 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.615 kb on - strand, within Dsui_0698at 695.632 kb on + strand, within Dsui_0698at 695.652 kb on - strandat 695.659 kb on + strandat 695.686 kb on + strandat 695.686 kb on + strandat 695.733 kb on - strandat 695.765 kb on - strandat 695.786 kb on - strandat 695.793 kb on + strandat 695.793 kb on + strandat 695.805 kb on + strand, within Dsui_0699at 695.815 kb on + strand, within Dsui_0699at 695.816 kb on + strand, within Dsui_0699at 695.861 kb on - strand, within Dsui_0699at 695.861 kb on - strand, within Dsui_0699at 695.864 kb on + strand, within Dsui_0699at 695.909 kb on + strand, within Dsui_0699at 695.929 kb on - strand, within Dsui_0699at 695.931 kb on - strand, within Dsui_0699at 695.944 kb on + strand, within Dsui_0699at 695.959 kb on - strand, within Dsui_0699at 696.017 kb on + strand, within Dsui_0699at 696.017 kb on + strand, within Dsui_0699at 696.070 kb on - strand, within Dsui_0699at 696.093 kb on - strand, within Dsui_0699at 696.104 kb on + strandat 696.356 kb on - strandat 696.463 kb on - strandat 696.551 kb on - strandat 696.615 kb on - strand, within Dsui_0700at 696.615 kb on - strand, within Dsui_0700

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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694,012 - Dsui_0697 0.63 +1.0
694,204 + Dsui_0697 0.71 +0.5
694,218 + Dsui_0697 0.72 -0.0
694,249 - Dsui_0697 0.73 +1.0
694,256 - Dsui_0697 0.73 +0.9
694,284 - Dsui_0697 0.74 +0.7
694,286 + -0.4
694,296 + Dsui_0697 0.75 +0.4
694,322 + Dsui_0697 0.76 +0.2
694,328 - Dsui_0697 0.76 +1.4
694,332 + Dsui_0697 0.76 +0.4
694,351 - Dsui_0697 0.77 +0.3
694,370 - Dsui_0697 0.78 +1.2
694,391 - Dsui_0697 0.79 +0.8
694,421 + Dsui_0697 0.80 +0.4
694,429 - Dsui_0697 0.81 +1.5
694,501 + Dsui_0697 0.84 +0.4
694,593 - Dsui_0697 0.88 +0.7
694,620 - Dsui_0697 0.89 -2.9
694,625 + Dsui_0697 0.89 +0.3
694,638 - Dsui_0697 0.90 +0.7
694,701 + +0.3
694,727 - +1.0
694,757 + +0.5
694,757 + -0.1
694,765 - +1.3
694,796 - +1.0
694,850 - +0.5
694,850 - +0.7
694,953 + +0.6
694,956 - +1.2
694,956 - +0.5
694,970 - +0.5
695,054 + Dsui_0698 0.19 +0.5
695,062 - Dsui_0698 0.19 +0.8
695,102 + Dsui_0698 0.24 +1.4
695,115 - Dsui_0698 0.26 +0.6
695,120 - Dsui_0698 0.27 +0.7
695,173 - Dsui_0698 0.33 +1.1
695,178 - Dsui_0698 0.34 -0.4
695,273 + Dsui_0698 0.45 +0.2
695,273 + Dsui_0698 0.45 -0.0
695,281 - Dsui_0698 0.46 +0.9
695,309 + Dsui_0698 0.50 +0.2
695,353 - Dsui_0698 0.55 +0.9
695,353 - Dsui_0698 0.55 +0.9
695,363 + Dsui_0698 0.56 +0.9
695,371 - Dsui_0698 0.57 +1.6
695,439 + Dsui_0698 0.66 +0.2
695,535 - Dsui_0698 0.77 +1.4
695,552 + Dsui_0698 0.80 -0.2
695,552 + Dsui_0698 0.80 +0.8
695,583 - Dsui_0698 0.83 +0.5
695,584 - Dsui_0698 0.83 +1.2
695,615 - Dsui_0698 0.87 +1.1
695,615 - Dsui_0698 0.87 +0.9
695,615 - Dsui_0698 0.87 +0.8
695,615 - Dsui_0698 0.87 +0.9
695,632 + Dsui_0698 0.89 +1.2
695,652 - +0.0
695,659 + +0.8
695,686 + +0.5
695,686 + +0.6
695,733 - +0.6
695,765 - +0.2
695,786 - +1.0
695,793 + +0.6
695,793 + +0.0
695,805 + Dsui_0699 0.10 +1.3
695,815 + Dsui_0699 0.12 -0.7
695,816 + Dsui_0699 0.12 -0.9
695,861 - Dsui_0699 0.19 +0.9
695,861 - Dsui_0699 0.19 -0.2
695,864 + Dsui_0699 0.19 -0.1
695,909 + Dsui_0699 0.26 -0.3
695,929 - Dsui_0699 0.29 -0.2
695,931 - Dsui_0699 0.29 +0.8
695,944 + Dsui_0699 0.31 +0.2
695,959 - Dsui_0699 0.33 +0.6
696,017 + Dsui_0699 0.42 +0.7
696,017 + Dsui_0699 0.42 +0.5
696,070 - Dsui_0699 0.50 -0.4
696,093 - Dsui_0699 0.53 +0.8
696,104 + -0.0
696,356 - +0.8
696,463 - +0.8
696,551 - +0.3
696,615 - Dsui_0700 0.28 +1.3
696,615 - Dsui_0700 0.28 +0.3

Or see this region's nucleotide sequence