Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0666 and Dsui_0667 are separated by 305 nucleotides Dsui_0667 and Dsui_0668 are separated by 186 nucleotides
Dsui_0666: Dsui_0666 - Na+/proline symporter, at 663,434 to 664,936
_0666
Dsui_0667: Dsui_0667 - hypothetical protein, at 665,242 to 665,448
_0667
Dsui_0668: Dsui_0668 - putative membrane protein, at 665,635 to 668,355
_0668
Position (kb) 665
666 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 664.400 kb on + strand, within Dsui_0666 at 664.408 kb on - strand, within Dsui_0666 at 664.527 kb on + strand, within Dsui_0666 at 664.527 kb on + strand at 664.535 kb on - strand, within Dsui_0666 at 664.535 kb on - strand, within Dsui_0666 at 664.612 kb on + strand, within Dsui_0666 at 664.724 kb on + strand, within Dsui_0666 at 664.732 kb on - strand, within Dsui_0666 at 664.919 kb on + strand at 664.919 kb on + strand at 664.937 kb on + strand at 664.984 kb on + strand at 664.984 kb on + strand at 664.989 kb on + strand at 664.989 kb on + strand at 664.992 kb on - strand at 665.027 kb on - strand at 665.086 kb on + strand at 665.086 kb on + strand at 665.086 kb on + strand at 665.087 kb on + strand at 665.087 kb on + strand at 665.092 kb on + strand at 665.094 kb on - strand at 665.094 kb on - strand at 665.094 kb on - strand at 665.095 kb on - strand at 665.095 kb on - strand at 665.097 kb on + strand at 665.097 kb on + strand at 665.097 kb on + strand at 665.100 kb on - strand at 665.105 kb on - strand at 665.105 kb on - strand at 665.105 kb on - strand at 665.110 kb on + strand at 665.118 kb on - strand at 665.134 kb on + strand at 665.134 kb on + strand at 665.142 kb on - strand at 665.148 kb on - strand at 665.266 kb on + strand, within Dsui_0667 at 665.266 kb on + strand at 665.266 kb on + strand, within Dsui_0667 at 665.266 kb on + strand, within Dsui_0667 at 665.313 kb on + strand at 665.313 kb on + strand, within Dsui_0667 at 665.313 kb on + strand, within Dsui_0667 at 665.330 kb on + strand, within Dsui_0667 at 665.333 kb on - strand, within Dsui_0667 at 665.371 kb on - strand, within Dsui_0667 at 665.446 kb on + strand at 665.504 kb on - strand at 665.530 kb on - strand at 665.536 kb on - strand at 665.685 kb on - strand at 665.685 kb on - strand at 665.703 kb on - strand at 665.822 kb on - strand at 666.025 kb on - strand, within Dsui_0668 at 666.025 kb on - strand, within Dsui_0668 at 666.031 kb on - strand, within Dsui_0668 at 666.110 kb on + strand, within Dsui_0668 at 666.118 kb on - strand at 666.133 kb on + strand, within Dsui_0668 at 666.252 kb on - strand, within Dsui_0668 at 666.253 kb on + strand, within Dsui_0668 at 666.283 kb on - strand, within Dsui_0668 at 666.284 kb on - strand, within Dsui_0668 at 666.284 kb on - strand, within Dsui_0668 at 666.314 kb on - strand, within Dsui_0668 at 666.314 kb on - strand, within Dsui_0668 at 666.336 kb on - strand, within Dsui_0668
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 664,400 + Dsui_0666 0.64 -2.6 664,408 - Dsui_0666 0.65 +0.3 664,527 + Dsui_0666 0.73 -2.3 664,527 + -1.9 664,535 - Dsui_0666 0.73 -1.8 664,535 - Dsui_0666 0.73 -2.1 664,612 + Dsui_0666 0.78 -0.6 664,724 + Dsui_0666 0.86 -1.1 664,732 - Dsui_0666 0.86 -1.3 664,919 + -3.2 664,919 + +0.5 664,937 + -2.3 664,984 + -1.5 664,984 + -1.1 664,989 + -0.7 664,989 + -2.9 664,992 - +0.7 665,027 - -1.1 665,086 + -1.9 665,086 + +0.3 665,086 + -2.9 665,087 + +0.1 665,087 + -1.4 665,092 + +1.4 665,094 - -0.6 665,094 - -0.1 665,094 - -0.3 665,095 - -1.5 665,095 - -0.1 665,097 + -0.7 665,097 + -0.9 665,097 + -0.3 665,100 - +0.2 665,105 - -0.7 665,105 - -0.3 665,105 - +1.3 665,110 + -1.0 665,118 - +0.3 665,134 + -0.4 665,134 + -0.6 665,142 - -1.4 665,148 - -0.3 665,266 + Dsui_0667 0.12 -1.1 665,266 + -0.1 665,266 + Dsui_0667 0.12 -0.3 665,266 + Dsui_0667 0.12 +0.1 665,313 + +1.5 665,313 + Dsui_0667 0.34 -2.1 665,313 + Dsui_0667 0.34 -0.9 665,330 + Dsui_0667 0.43 -1.5 665,333 - Dsui_0667 0.44 -1.4 665,371 - Dsui_0667 0.62 -0.2 665,446 + -0.1 665,504 - +0.6 665,530 - +0.8 665,536 - +0.7 665,685 - -0.5 665,685 - -1.0 665,703 - -0.5 665,822 - +0.5 666,025 - Dsui_0668 0.14 +0.5 666,025 - Dsui_0668 0.14 -0.3 666,031 - Dsui_0668 0.15 +1.7 666,110 + Dsui_0668 0.17 -0.4 666,118 - -1.7 666,133 + Dsui_0668 0.18 -0.3 666,252 - Dsui_0668 0.23 +1.2 666,253 + Dsui_0668 0.23 -0.2 666,283 - Dsui_0668 0.24 -0.3 666,284 - Dsui_0668 0.24 -0.8 666,284 - Dsui_0668 0.24 -0.2 666,314 - Dsui_0668 0.25 +0.7 666,314 - Dsui_0668 0.25 -0.5 666,336 - Dsui_0668 0.26 +0.3
Or see this region's nucleotide sequence