Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0662 and Dsui_0663 overlap by 8 nucleotides Dsui_0663 and Dsui_0664 overlap by 14 nucleotides Dsui_0664 and Dsui_0665 are separated by 78 nucleotides
Dsui_0662: Dsui_0662 - phosphomethylpyrimidine kinase, at 659,258 to 660,100
_0662
Dsui_0663: Dsui_0663 - thiamine-phosphate pyrophosphorylase, at 660,093 to 660,740
_0663
Dsui_0664: Dsui_0664 - glutamate-1-semialdehyde-2,1-aminomutase, at 660,727 to 662,010
_0664
Dsui_0665: Dsui_0665 - polyphosphate kinase 2, PA0141 family, at 662,089 to 663,288
_0665
Position (kb) 660
661
662
663 Strain fitness (log2 ratio) -1
0
1
2 at 660.104 kb on + strand at 660.723 kb on + strand at 662.104 kb on + strand at 662.225 kb on + strand, within Dsui_0665 at 662.225 kb on + strand at 662.226 kb on - strand, within Dsui_0665 at 662.233 kb on - strand, within Dsui_0665 at 662.233 kb on - strand, within Dsui_0665 at 662.329 kb on - strand, within Dsui_0665 at 662.366 kb on + strand, within Dsui_0665 at 662.454 kb on + strand, within Dsui_0665 at 662.454 kb on + strand, within Dsui_0665 at 662.454 kb on + strand, within Dsui_0665 at 662.568 kb on + strand, within Dsui_0665 at 662.668 kb on - strand, within Dsui_0665 at 662.708 kb on + strand, within Dsui_0665 at 662.716 kb on - strand, within Dsui_0665 at 662.751 kb on - strand, within Dsui_0665 at 662.792 kb on - strand, within Dsui_0665
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 660,104 + -1.3 660,723 + -0.5 662,104 + +0.0 662,225 + Dsui_0665 0.11 +1.1 662,225 + -1.0 662,226 - Dsui_0665 0.11 -1.4 662,233 - Dsui_0665 0.12 +0.7 662,233 - Dsui_0665 0.12 +0.3 662,329 - Dsui_0665 0.20 +1.1 662,366 + Dsui_0665 0.23 +2.6 662,454 + Dsui_0665 0.30 +0.3 662,454 + Dsui_0665 0.30 +0.8 662,454 + Dsui_0665 0.30 +0.5 662,568 + Dsui_0665 0.40 -1.2 662,668 - Dsui_0665 0.48 +1.4 662,708 + Dsui_0665 0.52 +1.7 662,716 - Dsui_0665 0.52 +1.1 662,751 - Dsui_0665 0.55 +1.0 662,792 - Dsui_0665 0.59 +1.3
Or see this region's nucleotide sequence