Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0513 and Dsui_0514 are separated by 96 nucleotides Dsui_0514 and Dsui_0515 are separated by 131 nucleotides Dsui_0515 and Dsui_0516 are separated by 87 nucleotides
Dsui_0513: Dsui_0513 - diguanylate cyclase (GGDEF) domain-containing protein, at 516,944 to 518,818
_0513
Dsui_0514: Dsui_0514 - hypothetical protein, at 518,915 to 520,018
_0514
Dsui_0515: Dsui_0515 - hypothetical protein, at 520,150 to 520,350
_0515
Dsui_0516: Dsui_0516 - Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) <small>(from data)</small>, at 520,438 to 522,429
_0516
Position (kb) 518
519
520
521 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 517.985 kb on - strand, within Dsui_0513 at 518.107 kb on - strand, within Dsui_0513 at 518.142 kb on + strand, within Dsui_0513 at 518.151 kb on - strand, within Dsui_0513 at 518.208 kb on - strand at 518.275 kb on + strand, within Dsui_0513 at 518.295 kb on - strand, within Dsui_0513 at 518.404 kb on - strand, within Dsui_0513 at 518.425 kb on - strand, within Dsui_0513 at 518.434 kb on + strand at 518.492 kb on - strand, within Dsui_0513 at 518.508 kb on - strand, within Dsui_0513 at 518.691 kb on - strand at 518.774 kb on + strand at 518.799 kb on + strand at 518.862 kb on - strand at 518.868 kb on + strand at 518.883 kb on - strand at 518.893 kb on - strand at 518.912 kb on + strand at 519.085 kb on - strand, within Dsui_0514 at 519.087 kb on + strand, within Dsui_0514 at 519.095 kb on + strand, within Dsui_0514 at 519.270 kb on - strand, within Dsui_0514 at 519.295 kb on + strand, within Dsui_0514 at 519.472 kb on - strand at 519.513 kb on + strand, within Dsui_0514 at 519.513 kb on + strand, within Dsui_0514 at 519.525 kb on + strand, within Dsui_0514 at 519.539 kb on - strand, within Dsui_0514 at 519.569 kb on - strand, within Dsui_0514 at 519.582 kb on + strand, within Dsui_0514 at 519.642 kb on - strand, within Dsui_0514 at 519.747 kb on + strand, within Dsui_0514 at 519.747 kb on + strand, within Dsui_0514 at 519.815 kb on + strand, within Dsui_0514 at 519.815 kb on + strand, within Dsui_0514 at 519.833 kb on + strand, within Dsui_0514 at 519.833 kb on - strand, within Dsui_0514 at 519.841 kb on - strand, within Dsui_0514 at 519.902 kb on - strand, within Dsui_0514 at 519.984 kb on - strand at 519.991 kb on - strand at 520.163 kb on + strand at 520.238 kb on - strand, within Dsui_0515 at 520.294 kb on - strand, within Dsui_0515 at 520.299 kb on - strand, within Dsui_0515 at 520.360 kb on + strand at 520.508 kb on + strand at 520.531 kb on - strand at 520.551 kb on - strand at 520.575 kb on - strand at 520.651 kb on - strand, within Dsui_0516 at 520.681 kb on + strand, within Dsui_0516 at 520.746 kb on + strand, within Dsui_0516 at 520.801 kb on - strand, within Dsui_0516 at 520.824 kb on - strand, within Dsui_0516 at 520.824 kb on - strand, within Dsui_0516 at 520.852 kb on + strand, within Dsui_0516 at 520.914 kb on - strand, within Dsui_0516 at 520.935 kb on - strand, within Dsui_0516 at 521.008 kb on - strand, within Dsui_0516
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 517,985 - Dsui_0513 0.56 -2.3 518,107 - Dsui_0513 0.62 -0.4 518,142 + Dsui_0513 0.64 -0.7 518,151 - Dsui_0513 0.64 +0.3 518,208 - +3.2 518,275 + Dsui_0513 0.71 -0.2 518,295 - Dsui_0513 0.72 +1.1 518,404 - Dsui_0513 0.78 +0.3 518,425 - Dsui_0513 0.79 +1.3 518,434 + -0.1 518,492 - Dsui_0513 0.83 +0.7 518,508 - Dsui_0513 0.83 +0.3 518,691 - -0.1 518,774 + -0.5 518,799 + -0.4 518,862 - -2.4 518,868 + -2.8 518,883 - -1.4 518,893 - -3.9 518,912 + +0.7 519,085 - Dsui_0514 0.15 +2.4 519,087 + Dsui_0514 0.16 +0.7 519,095 + Dsui_0514 0.16 +0.1 519,270 - Dsui_0514 0.32 +0.5 519,295 + Dsui_0514 0.34 +0.1 519,472 - +1.0 519,513 + Dsui_0514 0.54 +1.6 519,513 + Dsui_0514 0.54 +1.3 519,525 + Dsui_0514 0.55 +0.5 519,539 - Dsui_0514 0.57 -1.6 519,569 - Dsui_0514 0.59 +2.8 519,582 + Dsui_0514 0.60 +1.3 519,642 - Dsui_0514 0.66 +0.2 519,747 + Dsui_0514 0.75 +1.0 519,747 + Dsui_0514 0.75 +0.1 519,815 + Dsui_0514 0.82 +0.3 519,815 + Dsui_0514 0.82 +0.8 519,833 + Dsui_0514 0.83 +1.4 519,833 - Dsui_0514 0.83 +0.4 519,841 - Dsui_0514 0.84 -0.4 519,902 - Dsui_0514 0.89 -0.3 519,984 - +0.5 519,991 - +0.2 520,163 + -1.0 520,238 - Dsui_0515 0.44 -0.5 520,294 - Dsui_0515 0.72 +0.9 520,299 - Dsui_0515 0.74 +0.7 520,360 + +0.1 520,508 + -0.1 520,531 - +0.5 520,551 - +0.4 520,575 - +1.0 520,651 - Dsui_0516 0.11 -0.0 520,681 + Dsui_0516 0.12 -0.7 520,746 + Dsui_0516 0.15 +0.2 520,801 - Dsui_0516 0.18 -0.4 520,824 - Dsui_0516 0.19 +0.6 520,824 - Dsui_0516 0.19 +0.2 520,852 + Dsui_0516 0.21 +0.5 520,914 - Dsui_0516 0.24 -0.8 520,935 - Dsui_0516 0.25 -0.8 521,008 - Dsui_0516 0.29 +1.5
Or see this region's nucleotide sequence