Strain Fitness in Dechlorosoma suillum PS around Dsui_0499

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0497 and Dsui_0498 are separated by 16 nucleotidesDsui_0498 and Dsui_0499 are separated by 27 nucleotidesDsui_0499 and Dsui_0500 are separated by 31 nucleotides Dsui_0497: Dsui_0497 - TIGR00255 family protein, at 499,496 to 500,362 _0497 Dsui_0498: Dsui_0498 - guanylate kinase, at 500,379 to 500,987 _0498 Dsui_0499: Dsui_0499 - DNA-directed RNA polymerase, omega subunit, at 501,015 to 501,221 _0499 Dsui_0500: Dsui_0500 - (p)ppGpp synthetase, RelA/SpoT family, at 501,253 to 503,484 _0500 Position (kb) 501 502Strain fitness (log2 ratio) -3 -2 -1 0 1at 500.026 kb on + strand, within Dsui_0497at 500.049 kb on + strand, within Dsui_0497at 500.077 kb on + strand, within Dsui_0497at 500.147 kb on + strand, within Dsui_0497at 500.164 kb on + strand, within Dsui_0497at 500.287 kb on - strandat 500.293 kb on + strandat 501.006 kb on + strandat 501.035 kb on + strandat 501.040 kb on + strand, within Dsui_0499at 501.134 kb on - strand, within Dsui_0499at 501.215 kb on + strandat 501.230 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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500,026 + Dsui_0497 0.61 -0.8
500,049 + Dsui_0497 0.64 +0.7
500,077 + Dsui_0497 0.67 +0.2
500,147 + Dsui_0497 0.75 +0.1
500,164 + Dsui_0497 0.77 -0.2
500,287 - +0.0
500,293 + +0.4
501,006 + -0.9
501,035 + -0.8
501,040 + Dsui_0499 0.12 -3.5
501,134 - Dsui_0499 0.57 -0.6
501,215 + +0.4
501,230 - -1.1

Or see this region's nucleotide sequence