Strain Fitness in Dechlorosoma suillum PS around Dsui_0483

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0481 and Dsui_0482 are separated by 12 nucleotidesDsui_0482 and Dsui_0483 overlap by 4 nucleotidesDsui_0483 and Dsui_0484 are separated by 58 nucleotides Dsui_0481: Dsui_0481 - biopolymer transport protein, at 486,018 to 486,416 _0481 Dsui_0482: Dsui_0482 - TolQ protein, at 486,429 to 487,106 _0482 Dsui_0483: Dsui_0483 - tol-pal system-associated acyl-CoA thioesterase, at 487,103 to 487,528 _0483 Dsui_0484: Dsui_0484 - Holliday junction DNA helicase, RuvB subunit, at 487,587 to 488,669 _0484 Position (kb) 487 488Strain fitness (log2 ratio) -3 -2 -1 0 1at 486.426 kb on - strandat 486.426 kb on - strandat 487.176 kb on + strand, within Dsui_0483at 487.199 kb on - strand, within Dsui_0483at 487.250 kb on - strand, within Dsui_0483at 487.284 kb on + strand, within Dsui_0483at 487.294 kb on - strand, within Dsui_0483at 487.490 kb on + strandat 487.513 kb on - strandat 487.539 kb on - strandat 487.585 kb on + strandat 487.618 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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486,426 - +0.7
486,426 - +1.5
487,176 + Dsui_0483 0.17 +0.1
487,199 - Dsui_0483 0.23 +1.1
487,250 - Dsui_0483 0.35 +1.6
487,284 + Dsui_0483 0.42 -3.7
487,294 - Dsui_0483 0.45 +1.3
487,490 + -0.6
487,513 - +0.7
487,539 - +0.7
487,585 + -0.3
487,618 - +0.7

Or see this region's nucleotide sequence