Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4584 and Ac3H11_4585 are separated by 264 nucleotides Ac3H11_4585 and Ac3H11_4586 overlap by 4 nucleotides
Ac3H11_4584 - hypothetical protein, at 185,804 to 186,034
_4584
Ac3H11_4585 - DNA-binding heavy metal response regulator, at 186,299 to 186,985
_4585
Ac3H11_4586 - Heavy metal sensor histidine kinase, at 186,982 to 188,319
_4586
Position (kb) 186
187 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 185.415 kb on + strand at 185.656 kb on + strand at 185.656 kb on + strand at 185.656 kb on + strand at 185.656 kb on + strand at 185.656 kb on + strand at 185.656 kb on + strand at 185.657 kb on - strand at 185.657 kb on - strand at 185.657 kb on - strand at 185.657 kb on - strand at 185.657 kb on - strand at 185.657 kb on - strand at 185.705 kb on + strand at 185.740 kb on + strand at 185.740 kb on + strand at 185.740 kb on + strand at 185.740 kb on + strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.741 kb on - strand at 185.761 kb on + strand at 185.762 kb on - strand at 185.762 kb on - strand at 186.060 kb on + strand at 186.060 kb on + strand at 186.061 kb on - strand at 186.061 kb on - strand at 186.061 kb on - strand at 186.061 kb on - strand at 186.061 kb on - strand at 186.061 kb on - strand at 186.061 kb on - strand at 186.061 kb on - strand at 186.159 kb on - strand at 186.165 kb on + strand at 186.165 kb on + strand at 186.189 kb on + strand at 186.189 kb on + strand at 186.190 kb on - strand at 186.190 kb on - strand at 186.190 kb on - strand at 186.190 kb on - strand at 186.190 kb on - strand at 186.214 kb on + strand at 186.215 kb on - strand at 186.252 kb on - strand at 186.261 kb on + strand at 186.266 kb on + strand at 186.266 kb on + strand at 186.341 kb on + strand at 186.342 kb on - strand at 186.342 kb on - strand at 186.371 kb on + strand, within Ac3H11_4585 at 186.371 kb on + strand, within Ac3H11_4585 at 186.371 kb on + strand, within Ac3H11_4585 at 186.372 kb on - strand, within Ac3H11_4585 at 186.372 kb on - strand, within Ac3H11_4585 at 186.399 kb on + strand, within Ac3H11_4585 at 186.399 kb on + strand, within Ac3H11_4585 at 186.400 kb on - strand, within Ac3H11_4585 at 186.400 kb on - strand, within Ac3H11_4585 at 186.486 kb on + strand, within Ac3H11_4585 at 186.486 kb on + strand, within Ac3H11_4585 at 186.487 kb on - strand, within Ac3H11_4585 at 186.487 kb on - strand, within Ac3H11_4585 at 186.587 kb on + strand, within Ac3H11_4585 at 186.587 kb on + strand, within Ac3H11_4585 at 186.587 kb on + strand, within Ac3H11_4585 at 186.587 kb on + strand, within Ac3H11_4585 at 186.587 kb on + strand, within Ac3H11_4585 at 186.588 kb on - strand, within Ac3H11_4585 at 186.708 kb on + strand, within Ac3H11_4585 at 186.708 kb on + strand, within Ac3H11_4585 at 186.708 kb on + strand, within Ac3H11_4585 at 186.708 kb on + strand, within Ac3H11_4585 at 186.708 kb on + strand, within Ac3H11_4585 at 186.865 kb on + strand, within Ac3H11_4585 at 186.928 kb on + strand at 186.928 kb on + strand at 186.928 kb on + strand at 186.929 kb on - strand at 186.929 kb on - strand at 186.929 kb on - strand at 186.940 kb on + strand at 186.940 kb on + strand at 186.940 kb on + strand at 186.941 kb on - strand at 186.941 kb on - strand at 186.943 kb on + strand at 186.943 kb on + strand at 186.943 kb on + strand at 186.943 kb on + strand at 186.944 kb on - strand at 186.944 kb on - strand at 186.944 kb on - strand at 186.959 kb on + strand at 186.959 kb on + strand at 186.959 kb on + strand at 187.081 kb on + strand at 187.081 kb on + strand at 187.082 kb on - strand at 187.082 kb on - strand at 187.082 kb on - strand at 187.082 kb on - strand at 187.082 kb on - strand at 187.082 kb on - strand at 187.160 kb on + strand, within Ac3H11_4586 at 187.160 kb on + strand, within Ac3H11_4586 at 187.161 kb on - strand, within Ac3H11_4586 at 187.161 kb on - strand, within Ac3H11_4586 at 187.276 kb on + strand, within Ac3H11_4586 at 187.276 kb on + strand, within Ac3H11_4586 at 187.277 kb on - strand, within Ac3H11_4586 at 187.335 kb on - strand, within Ac3H11_4586 at 187.335 kb on - strand, within Ac3H11_4586 at 187.344 kb on + strand, within Ac3H11_4586 at 187.344 kb on + strand, within Ac3H11_4586 at 187.345 kb on - strand, within Ac3H11_4586 at 187.431 kb on + strand, within Ac3H11_4586 at 187.431 kb on + strand, within Ac3H11_4586 at 187.431 kb on + strand, within Ac3H11_4586 at 187.431 kb on + strand, within Ac3H11_4586 at 187.431 kb on + strand, within Ac3H11_4586 at 187.431 kb on + strand, within Ac3H11_4586 at 187.432 kb on - strand, within Ac3H11_4586 at 187.432 kb on - strand, within Ac3H11_4586 at 187.432 kb on - strand, within Ac3H11_4586 at 187.432 kb on - strand, within Ac3H11_4586 at 187.469 kb on + strand, within Ac3H11_4586 at 187.470 kb on - strand, within Ac3H11_4586 at 187.470 kb on - strand, within Ac3H11_4586 at 187.475 kb on + strand, within Ac3H11_4586 at 187.476 kb on - strand, within Ac3H11_4586 at 187.476 kb on - strand, within Ac3H11_4586 at 187.476 kb on - strand, within Ac3H11_4586 at 187.651 kb on + strand, within Ac3H11_4586 at 187.652 kb on - strand, within Ac3H11_4586 at 187.652 kb on - strand, within Ac3H11_4586 at 187.907 kb on + strand, within Ac3H11_4586 at 187.908 kb on - strand, within Ac3H11_4586 at 187.908 kb on - strand, within Ac3H11_4586 at 187.915 kb on + strand, within Ac3H11_4586 at 187.953 kb on + strand, within Ac3H11_4586 at 187.953 kb on + strand, within Ac3H11_4586 at 187.954 kb on - strand, within Ac3H11_4586 at 187.954 kb on - strand, within Ac3H11_4586
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 185,415 + +0.2 185,656 + +0.1 185,656 + -0.0 185,656 + -0.8 185,656 + -0.3 185,656 + +1.1 185,656 + +2.1 185,657 - -0.1 185,657 - +1.0 185,657 - -1.0 185,657 - -1.2 185,657 - -0.9 185,657 - -0.4 185,705 + +0.4 185,740 + -1.0 185,740 + -0.0 185,740 + +0.3 185,740 + +1.2 185,741 - -1.3 185,741 - -3.2 185,741 - -0.6 185,741 - -0.4 185,741 - +0.7 185,741 - +1.3 185,741 - -3.1 185,741 - +0.0 185,741 - -0.6 185,761 + -0.6 185,762 - +0.7 185,762 - +0.7 186,060 + -3.5 186,060 + +0.2 186,061 - -2.7 186,061 - -0.8 186,061 - -1.0 186,061 - -0.5 186,061 - +0.9 186,061 - +3.1 186,061 - -0.1 186,061 - -0.3 186,159 - -1.2 186,165 + +0.1 186,165 + -0.1 186,189 + -0.6 186,189 + -0.4 186,190 - +0.7 186,190 - +0.5 186,190 - +0.1 186,190 - +0.2 186,190 - +1.1 186,214 + +0.7 186,215 - +0.9 186,252 - -0.3 186,261 + +0.8 186,266 + +0.4 186,266 + +0.2 186,341 + +0.5 186,342 - +0.2 186,342 - +0.5 186,371 + Ac3H11_4585 0.10 -0.8 186,371 + Ac3H11_4585 0.10 -0.7 186,371 + Ac3H11_4585 0.10 -1.6 186,372 - Ac3H11_4585 0.11 -2.3 186,372 - Ac3H11_4585 0.11 -1.1 186,399 + Ac3H11_4585 0.15 -3.5 186,399 + Ac3H11_4585 0.15 -0.7 186,400 - Ac3H11_4585 0.15 -0.1 186,400 - Ac3H11_4585 0.15 -1.0 186,486 + Ac3H11_4585 0.27 +0.4 186,486 + Ac3H11_4585 0.27 -1.9 186,487 - Ac3H11_4585 0.27 -0.5 186,487 - Ac3H11_4585 0.27 -0.1 186,587 + Ac3H11_4585 0.42 -1.9 186,587 + Ac3H11_4585 0.42 -0.2 186,587 + Ac3H11_4585 0.42 -0.9 186,587 + Ac3H11_4585 0.42 +0.5 186,587 + Ac3H11_4585 0.42 -1.4 186,588 - Ac3H11_4585 0.42 +0.5 186,708 + Ac3H11_4585 0.60 +0.2 186,708 + Ac3H11_4585 0.60 -0.7 186,708 + Ac3H11_4585 0.60 -0.9 186,708 + Ac3H11_4585 0.60 +0.0 186,708 + Ac3H11_4585 0.60 +1.3 186,865 + Ac3H11_4585 0.82 +0.1 186,928 + +0.7 186,928 + -1.8 186,928 + -1.4 186,929 - +0.5 186,929 - -0.7 186,929 - -2.7 186,940 + +2.1 186,940 + +0.4 186,940 + -1.0 186,941 - +1.3 186,941 - -0.0 186,943 + -2.0 186,943 + -0.2 186,943 + -0.4 186,943 + +0.4 186,944 - +0.5 186,944 - +0.4 186,944 - +0.3 186,959 + -0.9 186,959 + -0.2 186,959 + -3.0 187,081 + -3.6 187,081 + +1.0 187,082 - -1.1 187,082 - -2.2 187,082 - -0.8 187,082 - +0.1 187,082 - -0.5 187,082 - +0.5 187,160 + Ac3H11_4586 0.13 +0.2 187,160 + Ac3H11_4586 0.13 +0.7 187,161 - Ac3H11_4586 0.13 -0.6 187,161 - Ac3H11_4586 0.13 -1.4 187,276 + Ac3H11_4586 0.22 -0.3 187,276 + Ac3H11_4586 0.22 +2.0 187,277 - Ac3H11_4586 0.22 -1.0 187,335 - Ac3H11_4586 0.26 -0.8 187,335 - Ac3H11_4586 0.26 -0.8 187,344 + Ac3H11_4586 0.27 -0.5 187,344 + Ac3H11_4586 0.27 -3.1 187,345 - Ac3H11_4586 0.27 +0.1 187,431 + Ac3H11_4586 0.34 +0.4 187,431 + Ac3H11_4586 0.34 +0.6 187,431 + Ac3H11_4586 0.34 -1.0 187,431 + Ac3H11_4586 0.34 +0.2 187,431 + Ac3H11_4586 0.34 -1.1 187,431 + Ac3H11_4586 0.34 +0.4 187,432 - Ac3H11_4586 0.34 -1.2 187,432 - Ac3H11_4586 0.34 +0.6 187,432 - Ac3H11_4586 0.34 +1.2 187,432 - Ac3H11_4586 0.34 -0.8 187,469 + Ac3H11_4586 0.36 +1.4 187,470 - Ac3H11_4586 0.36 +0.6 187,470 - Ac3H11_4586 0.36 -0.3 187,475 + Ac3H11_4586 0.37 -0.8 187,476 - Ac3H11_4586 0.37 +1.8 187,476 - Ac3H11_4586 0.37 +0.3 187,476 - Ac3H11_4586 0.37 +1.0 187,651 + Ac3H11_4586 0.50 -1.6 187,652 - Ac3H11_4586 0.50 -0.8 187,652 - Ac3H11_4586 0.50 +1.2 187,907 + Ac3H11_4586 0.69 +0.3 187,908 - Ac3H11_4586 0.69 +0.4 187,908 - Ac3H11_4586 0.69 +0.4 187,915 + Ac3H11_4586 0.70 -3.9 187,953 + Ac3H11_4586 0.73 -0.1 187,953 + Ac3H11_4586 0.73 -0.0 187,954 - Ac3H11_4586 0.73 +0.8 187,954 - Ac3H11_4586 0.73 +0.2
Or see this region's nucleotide sequence