Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4260 and Ac3H11_4261 are separated by 73 nucleotides Ac3H11_4261 and Ac3H11_4262 overlap by 4 nucleotides Ac3H11_4262 and Ac3H11_4263 overlap by 4 nucleotides
Ac3H11_4260 - LSU ribosomal protein L34p, at 35,982 to 36,116
_4260
Ac3H11_4261 - Ribonuclease P protein component (EC 3.1.26.5), at 36,190 to 36,705
_4261
Ac3H11_4262 - Protein YidD, at 36,702 to 37,001
_4262
Ac3H11_4263 - Inner membrane protein translocase component YidC, long form, at 36,998 to 38,710
_4263
Position (kb) 36
37
38 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 36.130 kb on + strand at 36.130 kb on + strand at 36.804 kb on + strand, within Ac3H11_4262 at 36.804 kb on + strand, within Ac3H11_4262 at 36.804 kb on + strand, within Ac3H11_4262 at 36.804 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.849 kb on + strand, within Ac3H11_4262 at 36.871 kb on + strand, within Ac3H11_4262 at 36.871 kb on + strand, within Ac3H11_4262
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 36,130 + -0.4 36,130 + -0.4 36,804 + Ac3H11_4262 0.34 +1.9 36,804 + Ac3H11_4262 0.34 -0.3 36,804 + Ac3H11_4262 0.34 +0.6 36,804 + Ac3H11_4262 0.34 -0.3 36,849 + Ac3H11_4262 0.49 -0.4 36,849 + Ac3H11_4262 0.49 +1.4 36,849 + Ac3H11_4262 0.49 -0.2 36,849 + Ac3H11_4262 0.49 +0.4 36,849 + Ac3H11_4262 0.49 -0.0 36,849 + Ac3H11_4262 0.49 -3.7 36,849 + Ac3H11_4262 0.49 +1.1 36,849 + Ac3H11_4262 0.49 -0.5 36,849 + Ac3H11_4262 0.49 -0.1 36,849 + Ac3H11_4262 0.49 +0.6 36,871 + Ac3H11_4262 0.56 +0.1 36,871 + Ac3H11_4262 0.56 +0.1
Or see this region's nucleotide sequence