Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3717 and Ac3H11_3718 are separated by 46 nucleotides Ac3H11_3718 and Ac3H11_3719 are separated by 36 nucleotides Ac3H11_3719 and Ac3H11_3720 are separated by 160 nucleotides
Ac3H11_3717 - Haloacid dehalogenase, type II (EC 3.8.1.2), at 77,412 to 78,140
_3717
Ac3H11_3718 - hypothetical protein, at 78,187 to 78,357
_3718
Ac3H11_3719 - FIG00978734: hypothetical protein, at 78,394 to 79,617
_3719
Ac3H11_3720 - Uncharacterized PLP-dependent aminotransferase YfdZ, at 79,778 to 81,004
_3720
Position (kb) 78
79
80 Strain fitness (log2 ratio) -2
-1
0
1
2 at 77.527 kb on + strand, within Ac3H11_3717 at 77.527 kb on + strand, within Ac3H11_3717 at 77.527 kb on + strand, within Ac3H11_3717 at 77.635 kb on + strand, within Ac3H11_3717 at 77.635 kb on + strand, within Ac3H11_3717 at 77.635 kb on + strand, within Ac3H11_3717 at 77.636 kb on - strand, within Ac3H11_3717 at 77.656 kb on + strand, within Ac3H11_3717 at 77.656 kb on + strand, within Ac3H11_3717 at 77.656 kb on + strand, within Ac3H11_3717 at 77.656 kb on + strand, within Ac3H11_3717 at 77.657 kb on - strand, within Ac3H11_3717 at 77.657 kb on - strand, within Ac3H11_3717 at 78.019 kb on + strand, within Ac3H11_3717 at 78.019 kb on + strand, within Ac3H11_3717 at 78.188 kb on + strand at 78.188 kb on + strand at 78.188 kb on + strand at 78.188 kb on + strand at 78.261 kb on + strand, within Ac3H11_3718 at 78.261 kb on + strand, within Ac3H11_3718 at 78.261 kb on + strand, within Ac3H11_3718 at 78.261 kb on + strand, within Ac3H11_3718 at 78.262 kb on - strand, within Ac3H11_3718 at 78.290 kb on + strand, within Ac3H11_3718 at 78.290 kb on + strand, within Ac3H11_3718 at 78.589 kb on + strand, within Ac3H11_3719 at 78.590 kb on - strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.682 kb on + strand, within Ac3H11_3719 at 78.683 kb on - strand, within Ac3H11_3719 at 78.683 kb on - strand, within Ac3H11_3719 at 78.683 kb on - strand, within Ac3H11_3719 at 78.683 kb on - strand, within Ac3H11_3719 at 78.683 kb on - strand, within Ac3H11_3719 at 78.683 kb on - strand, within Ac3H11_3719 at 78.722 kb on - strand, within Ac3H11_3719 at 78.772 kb on + strand, within Ac3H11_3719 at 78.772 kb on + strand, within Ac3H11_3719 at 78.772 kb on + strand, within Ac3H11_3719 at 78.773 kb on - strand, within Ac3H11_3719 at 78.773 kb on - strand, within Ac3H11_3719 at 78.773 kb on - strand, within Ac3H11_3719 at 78.773 kb on - strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.111 kb on + strand, within Ac3H11_3719 at 79.112 kb on - strand, within Ac3H11_3719 at 79.512 kb on + strand at 79.554 kb on + strand at 79.554 kb on + strand at 79.555 kb on - strand at 79.700 kb on + strand at 79.700 kb on + strand at 79.700 kb on + strand at 79.701 kb on - strand at 79.833 kb on - strand at 79.833 kb on - strand at 79.985 kb on + strand, within Ac3H11_3720 at 80.036 kb on + strand, within Ac3H11_3720 at 80.036 kb on + strand, within Ac3H11_3720 at 80.036 kb on + strand, within Ac3H11_3720 at 80.037 kb on - strand, within Ac3H11_3720 at 80.172 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.187 kb on - strand, within Ac3H11_3720 at 80.283 kb on - strand, within Ac3H11_3720 at 80.283 kb on - strand, within Ac3H11_3720 at 80.283 kb on - strand, within Ac3H11_3720 at 80.409 kb on + strand, within Ac3H11_3720 at 80.410 kb on - strand, within Ac3H11_3720 at 80.414 kb on + strand, within Ac3H11_3720 at 80.414 kb on + strand, within Ac3H11_3720 at 80.415 kb on - strand, within Ac3H11_3720 at 80.429 kb on + strand, within Ac3H11_3720 at 80.429 kb on + strand, within Ac3H11_3720 at 80.430 kb on - strand, within Ac3H11_3720 at 80.513 kb on + strand, within Ac3H11_3720 at 80.514 kb on - strand, within Ac3H11_3720 at 80.591 kb on + strand, within Ac3H11_3720 at 80.592 kb on - strand, within Ac3H11_3720 at 80.600 kb on + strand, within Ac3H11_3720
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 77,527 + Ac3H11_3717 0.16 -0.2 77,527 + Ac3H11_3717 0.16 -1.1 77,527 + Ac3H11_3717 0.16 -0.1 77,635 + Ac3H11_3717 0.31 -0.4 77,635 + Ac3H11_3717 0.31 -0.7 77,635 + Ac3H11_3717 0.31 +0.7 77,636 - Ac3H11_3717 0.31 +1.5 77,656 + Ac3H11_3717 0.33 +2.4 77,656 + Ac3H11_3717 0.33 +0.8 77,656 + Ac3H11_3717 0.33 +0.9 77,656 + Ac3H11_3717 0.33 +1.1 77,657 - Ac3H11_3717 0.34 -1.7 77,657 - Ac3H11_3717 0.34 +1.9 78,019 + Ac3H11_3717 0.83 -0.6 78,019 + Ac3H11_3717 0.83 -0.9 78,188 + +0.3 78,188 + +1.7 78,188 + -1.0 78,188 + -0.8 78,261 + Ac3H11_3718 0.43 +0.0 78,261 + Ac3H11_3718 0.43 -1.5 78,261 + Ac3H11_3718 0.43 -1.4 78,261 + Ac3H11_3718 0.43 -0.9 78,262 - Ac3H11_3718 0.44 -0.2 78,290 + Ac3H11_3718 0.60 -1.5 78,290 + Ac3H11_3718 0.60 -2.5 78,589 + Ac3H11_3719 0.16 +0.5 78,590 - Ac3H11_3719 0.16 +2.5 78,682 + Ac3H11_3719 0.24 +0.3 78,682 + Ac3H11_3719 0.24 -0.5 78,682 + Ac3H11_3719 0.24 -0.2 78,682 + Ac3H11_3719 0.24 -0.5 78,682 + Ac3H11_3719 0.24 +0.3 78,682 + Ac3H11_3719 0.24 +0.9 78,682 + Ac3H11_3719 0.24 -2.6 78,682 + Ac3H11_3719 0.24 +0.3 78,682 + Ac3H11_3719 0.24 +0.7 78,682 + Ac3H11_3719 0.24 +1.9 78,683 - Ac3H11_3719 0.24 +0.1 78,683 - Ac3H11_3719 0.24 -1.5 78,683 - Ac3H11_3719 0.24 -0.6 78,683 - Ac3H11_3719 0.24 +0.1 78,683 - Ac3H11_3719 0.24 -2.0 78,683 - Ac3H11_3719 0.24 +1.3 78,722 - Ac3H11_3719 0.27 +1.8 78,772 + Ac3H11_3719 0.31 +1.0 78,772 + Ac3H11_3719 0.31 +0.7 78,772 + Ac3H11_3719 0.31 +1.1 78,773 - Ac3H11_3719 0.31 -1.5 78,773 - Ac3H11_3719 0.31 +1.0 78,773 - Ac3H11_3719 0.31 -0.8 78,773 - Ac3H11_3719 0.31 -1.5 79,111 + Ac3H11_3719 0.59 +0.8 79,111 + Ac3H11_3719 0.59 -0.2 79,111 + Ac3H11_3719 0.59 +0.1 79,111 + Ac3H11_3719 0.59 +1.8 79,111 + Ac3H11_3719 0.59 -0.1 79,112 - Ac3H11_3719 0.59 +2.2 79,512 + +1.4 79,554 + -1.5 79,554 + +1.1 79,555 - +2.1 79,700 + -0.3 79,700 + +0.4 79,700 + +0.8 79,701 - +0.5 79,833 - -1.8 79,833 - -2.6 79,985 + Ac3H11_3720 0.17 -0.8 80,036 + Ac3H11_3720 0.21 +0.5 80,036 + Ac3H11_3720 0.21 -1.1 80,036 + Ac3H11_3720 0.21 -1.0 80,037 - Ac3H11_3720 0.21 -0.4 80,172 - Ac3H11_3720 0.32 +0.5 80,187 - Ac3H11_3720 0.33 -0.4 80,187 - Ac3H11_3720 0.33 -1.3 80,187 - Ac3H11_3720 0.33 +0.8 80,187 - Ac3H11_3720 0.33 -0.6 80,283 - Ac3H11_3720 0.41 +1.3 80,283 - Ac3H11_3720 0.41 -0.5 80,283 - Ac3H11_3720 0.41 -1.2 80,409 + Ac3H11_3720 0.51 -2.4 80,410 - Ac3H11_3720 0.52 -0.8 80,414 + Ac3H11_3720 0.52 -1.6 80,414 + Ac3H11_3720 0.52 +2.0 80,415 - Ac3H11_3720 0.52 -0.8 80,429 + Ac3H11_3720 0.53 +0.6 80,429 + Ac3H11_3720 0.53 -0.4 80,430 - Ac3H11_3720 0.53 -0.2 80,513 + Ac3H11_3720 0.60 +0.9 80,514 - Ac3H11_3720 0.60 +1.8 80,591 + Ac3H11_3720 0.66 -2.6 80,592 - Ac3H11_3720 0.66 +0.4 80,600 + Ac3H11_3720 0.67 -0.1
Or see this region's nucleotide sequence