Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27640 and AO353_27645 are separated by 259 nucleotides AO353_27645 and AO353_27650 are separated by 58 nucleotides AO353_27650 and AO353_27655 are separated by 329 nucleotides
AO353_27640: AO353_27640 - recombination factor protein RarA, at 6,022,649 to 6,023,974
_27640
AO353_27645: AO353_27645 - outer membrane lipoprotein carrier protein LolA, at 6,024,234 to 6,024,857
_27645
AO353_27650: AO353_27650 - cell division protein FtsK, at 6,024,916 to 6,027,321
_27650
AO353_27655: AO353_27655 - thioredoxin reductase, at 6,027,651 to 6,028,601
_27655
Position (kb)
6024
6025
6026
6027
6028 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 6023.979 kb on + strand at 6023.986 kb on - strand at 6023.999 kb on - strand at 6024.063 kb on + strand at 6024.139 kb on + strand at 6024.139 kb on + strand at 6024.153 kb on + strand at 6024.153 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.179 kb on - strand at 6024.179 kb on - strand at 6024.179 kb on - strand at 6024.236 kb on - strand at 6024.236 kb on - strand at 6024.236 kb on - strand at 6024.236 kb on - strand at 6024.874 kb on - strand at 6024.928 kb on - strand at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.632 kb on - strand, within AO353_27650 at 6026.052 kb on - strand, within AO353_27650 at 6026.426 kb on - strand, within AO353_27650 at 6026.426 kb on - strand, within AO353_27650 at 6027.067 kb on - strand, within AO353_27650 at 6027.067 kb on - strand, within AO353_27650 at 6027.140 kb on - strand at 6027.160 kb on - strand at 6027.189 kb on - strand at 6027.189 kb on - strand at 6027.396 kb on - strand at 6027.430 kb on - strand at 6027.486 kb on - strand at 6027.513 kb on - strand at 6027.528 kb on - strand at 6027.564 kb on - strand at 6027.564 kb on - strand at 6027.564 kb on - strand at 6027.564 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.663 kb on - strand at 6027.663 kb on - strand at 6027.720 kb on + strand at 6027.752 kb on + strand, within AO353_27655 at 6027.753 kb on - strand, within AO353_27655 at 6027.753 kb on - strand, within AO353_27655 at 6027.753 kb on - strand, within AO353_27655 at 6027.895 kb on - strand, within AO353_27655 at 6027.895 kb on - strand, within AO353_27655 at 6027.895 kb on - strand, within AO353_27655 at 6027.960 kb on + strand, within AO353_27655 at 6027.960 kb on + strand, within AO353_27655 at 6027.960 kb on + strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.006 kb on - strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.141 kb on - strand at 6028.141 kb on - strand, within AO353_27655 at 6028.141 kb on - strand, within AO353_27655 at 6028.141 kb on - strand, within AO353_27655 at 6028.282 kb on + strand, within AO353_27655 at 6028.282 kb on + strand, within AO353_27655 at 6028.282 kb on + strand, within AO353_27655 at 6028.283 kb on - strand, within AO353_27655 at 6028.283 kb on - strand, within AO353_27655
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 6,023,979 + +0.0 6,023,986 - -0.6 6,023,999 - -1.5 6,024,063 + +1.5 6,024,139 + +0.5 6,024,139 + +0.9 6,024,153 + +0.2 6,024,153 + +2.1 6,024,178 + +1.8 6,024,178 + -0.4 6,024,178 + +0.1 6,024,178 + +0.5 6,024,178 + +2.3 6,024,178 + -0.6 6,024,179 - -1.7 6,024,179 - +0.3 6,024,179 - -0.2 6,024,236 - +0.8 6,024,236 - +0.1 6,024,236 - -0.0 6,024,236 - +1.8 6,024,874 - +1.7 6,024,928 - +0.5 6,025,308 - AO353_27650 0.16 -1.1 6,025,308 - AO353_27650 0.16 -1.1 6,025,308 - AO353_27650 0.16 -0.7 6,025,308 - AO353_27650 0.16 +1.5 6,025,308 - AO353_27650 0.16 -0.5 6,025,308 - AO353_27650 0.16 -0.5 6,025,308 - AO353_27650 0.16 -2.1 6,025,308 - AO353_27650 0.16 -1.1 6,025,308 - AO353_27650 0.16 +0.2 6,025,308 - AO353_27650 0.16 +2.1 6,025,632 - AO353_27650 0.30 -2.5 6,026,052 - AO353_27650 0.47 -0.1 6,026,426 - AO353_27650 0.63 -0.7 6,026,426 - AO353_27650 0.63 -1.1 6,027,067 - AO353_27650 0.89 -0.1 6,027,067 - AO353_27650 0.89 +0.5 6,027,140 - -0.8 6,027,160 - -1.1 6,027,189 - -0.7 6,027,189 - +0.1 6,027,396 - -0.5 6,027,430 - +0.3 6,027,486 - +1.3 6,027,513 - +1.5 6,027,528 - -0.4 6,027,564 - -0.2 6,027,564 - -0.1 6,027,564 - -1.5 6,027,564 - +1.5 6,027,571 - -0.3 6,027,571 - -1.8 6,027,571 - -0.9 6,027,571 - +0.2 6,027,571 - +3.1 6,027,571 - -0.9 6,027,571 - -0.5 6,027,571 - -0.1 6,027,663 - +1.0 6,027,663 - +1.7 6,027,720 + -0.5 6,027,752 + AO353_27655 0.11 +0.2 6,027,753 - AO353_27655 0.11 -0.5 6,027,753 - AO353_27655 0.11 +0.3 6,027,753 - AO353_27655 0.11 +1.3 6,027,895 - AO353_27655 0.26 +0.3 6,027,895 - AO353_27655 0.26 +0.5 6,027,895 - AO353_27655 0.26 -0.5 6,027,960 + AO353_27655 0.32 +0.4 6,027,960 + AO353_27655 0.32 -0.4 6,027,960 + AO353_27655 0.32 -1.2 6,027,961 - AO353_27655 0.33 +1.1 6,027,961 - AO353_27655 0.33 +1.5 6,027,961 - AO353_27655 0.33 +0.2 6,027,961 - AO353_27655 0.33 +0.5 6,027,961 - AO353_27655 0.33 +0.3 6,027,961 - AO353_27655 0.33 -1.1 6,027,961 - AO353_27655 0.33 -0.6 6,027,961 - AO353_27655 0.33 -0.2 6,027,961 - AO353_27655 0.33 -0.4 6,027,961 - AO353_27655 0.33 +0.5 6,027,961 - AO353_27655 0.33 +1.2 6,027,961 - AO353_27655 0.33 +0.3 6,028,005 + AO353_27655 0.37 -2.3 6,028,005 + AO353_27655 0.37 +0.8 6,028,005 + AO353_27655 0.37 +0.5 6,028,005 + AO353_27655 0.37 -1.5 6,028,005 + AO353_27655 0.37 +4.0 6,028,005 + AO353_27655 0.37 +3.0 6,028,006 - AO353_27655 0.37 +0.9 6,028,140 + AO353_27655 0.51 +0.5 6,028,140 + AO353_27655 0.51 -1.2 6,028,140 + AO353_27655 0.51 -0.5 6,028,140 + AO353_27655 0.51 -0.2 6,028,141 - +0.5 6,028,141 - AO353_27655 0.52 -1.3 6,028,141 - AO353_27655 0.52 +0.5 6,028,141 - AO353_27655 0.52 -0.5 6,028,282 + AO353_27655 0.66 +1.1 6,028,282 + AO353_27655 0.66 -0.5 6,028,282 + AO353_27655 0.66 +0.2 6,028,283 - AO353_27655 0.66 +0.5 6,028,283 - AO353_27655 0.66 -2.3
Or see this region's nucleotide sequence