Strain Fitness in Pseudomonas fluorescens FW300-N2E3

Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26135

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	LB
				remove
5,752,465	+	AO353_26130	0.78	+0.8
5,752,465	+	AO353_26130	0.78	-0.6
5,752,465	+	AO353_26130	0.78	+0.6
5,752,465	+	AO353_26130	0.78	+0.4
5,752,465	+	AO353_26130	0.78	+0.8
5,752,465	+	AO353_26130	0.78	+0.2
5,752,465	+	AO353_26130	0.78	-0.2
5,752,465	+	AO353_26130	0.78	-0.6
5,752,465	+	AO353_26130	0.78	-2.0
5,752,465	+	AO353_26130	0.78	+1.3
5,752,465	+	AO353_26130	0.78	+0.4
5,752,465	+	AO353_26130	0.78	-0.1
5,752,466	-	AO353_26130	0.78	+0.1
5,752,466	-	AO353_26130	0.78	-0.9
5,752,466	-	AO353_26130	0.78	+1.3
5,752,466	-	AO353_26130	0.78	-0.6
5,752,466	-	AO353_26130	0.78	-0.6
5,752,466	-	AO353_26130	0.78	+0.0
5,752,466	-	AO353_26130	0.78	+0.3
5,752,487	+	AO353_26130	0.79	+1.1
5,752,488	-	AO353_26130	0.79	+0.4
5,752,526	+	AO353_26130	0.80	+0.2
5,752,526	+	AO353_26130	0.80	-0.7
5,752,527	-	AO353_26130	0.80	-1.6
5,752,552	+	AO353_26130	0.81	+0.0
5,752,552	+	AO353_26130	0.81	+1.4
5,752,552	+	AO353_26130	0.81	+0.0
5,752,552	+	AO353_26130	0.81	-0.6
5,752,553	-	AO353_26130	0.81	+0.2
5,752,553	-	AO353_26130	0.81	+0.7
5,752,666	-	AO353_26130	0.84	+0.4
5,752,771	+	AO353_26130	0.87	-0.4
5,752,771	+	AO353_26130	0.87	-1.0
5,752,805	-	AO353_26130	0.88	-0.3
5,752,805	-	AO353_26130	0.88	+3.2
5,752,805	-	AO353_26130	0.88	+0.2
5,752,984	+			-0.2
5,752,984	+			+0.4
5,752,984	+			-0.8
5,752,984	+			+0.0
5,752,985	-			-1.6
5,752,985	-			+0.2
5,752,985	-			+0.3
5,752,985	-			-0.4
5,752,985	-			+0.4
5,752,985	-			-1.8
5,752,985	-			+0.4
5,753,038	+			-0.3
5,753,039	-			+0.1
5,753,039	-			-0.5
5,753,042	+			-0.4
5,753,086	+			-0.8
5,753,086	+			+0.0
5,753,220	-			-0.6
5,753,243	+			-0.2
5,753,243	+			+1.1
5,753,449	+			-1.3
5,753,450	-			+1.4
5,753,450	-			-1.2
5,753,457	-			+0.4
5,753,467	+			-2.9
5,753,467	+			+0.4
5,753,467	+			+0.4
5,753,468	-			+2.0
5,753,569	+	AO353_26135	0.20	+0.4
5,753,569	+	AO353_26135	0.20	+1.2
5,753,569	+			+0.4
5,753,570	-	AO353_26135	0.20	+0.9
5,753,716	+	AO353_26135	0.44	+1.1
5,753,716	+	AO353_26135	0.44	+0.4
5,753,716	+	AO353_26135	0.44	-1.2
5,753,717	-	AO353_26135	0.44	-0.7
5,753,717	-	AO353_26135	0.44	+2.7
5,753,717	-	AO353_26135	0.44	+0.2
5,753,717	-	AO353_26135	0.44	+1.2
5,753,717	-	AO353_26135	0.44	+0.6
5,753,811	-			-1.9
5,753,811	-	AO353_26135	0.60	-0.7
5,753,852	+	AO353_26135	0.66	+0.1
5,753,896	-	AO353_26135	0.74	-1.1
5,753,972	-	AO353_26135	0.86	-1.3
5,753,978	+	AO353_26135	0.87	+0.6
5,753,978	+	AO353_26135	0.87	+1.4
5,753,979	-	AO353_26135	0.87	-0.2
5,754,037	+			+0.2
5,754,037	+			-1.4
5,754,037	+			+0.4
5,754,037	+			-0.6
5,754,037	+			+1.0
5,754,037	+			+0.7
5,754,037	+			+0.2
5,754,037	+			-1.9
5,754,038	-			-1.2
5,754,038	-			-0.7
5,754,038	-			-0.3
5,754,038	-			+1.2
5,754,038	-			+0.2
5,754,043	-			-0.6
5,754,043	-			+0.8
5,754,044	+			-1.4
5,754,044	+			+1.2
5,754,044	+			+1.0
5,754,044	+			-1.2
5,754,044	+			-1.2
5,754,044	+			-1.2
5,754,045	-			+0.1
5,754,045	-			-0.2
5,754,045	-			+0.4
5,754,045	-			-0.6
5,754,045	-			+0.2
5,754,045	-			-2.2
5,754,045	-			-1.4
5,754,045	-			-0.7
5,754,045	-			-1.4
5,754,045	-			-0.6
5,754,117	+			+1.2
5,754,117	+			-0.2
5,754,117	+			-1.9
5,754,117	+			+0.2
5,754,118	-			-0.6
5,754,118	-			+0.9
5,754,118	-			-0.3
5,754,118	-			-0.3
5,754,118	-			+0.6
5,754,118	-			+0.2
5,754,118	-			-1.4
5,754,118	-			-0.4
5,754,118	-			-1.2
5,754,118	-			+1.4
5,754,118	-			-1.2
5,754,118	-			+0.4
5,754,118	-			+2.0
5,754,118	-			+0.6
5,754,118	-			-1.2
5,754,118	-			-2.6
5,754,118	-			-0.2
5,754,119	+			-1.3
5,754,119	+			+0.4
5,754,119	+			-1.2
5,754,119	+			+3.0
5,754,119	+			+0.4
5,754,119	+			+0.6
5,754,119	+			+0.4
5,754,119	+			-1.0
5,754,119	+			+0.7
5,754,119	+			-0.1
5,754,119	+			+0.6
5,754,119	+			+0.0
5,754,119	+			+0.4
5,754,119	+			-1.6
5,754,119	+			+1.0
5,754,119	+			+1.2
5,754,119	+			+0.7
5,754,119	+			-1.9
5,754,120	-			+0.2
5,754,120	-			-1.0
5,754,120	-			+0.2
5,754,120	-			-0.4
5,754,120	-			+2.9
5,754,120	-			-0.0
5,754,120	-			-0.6
5,754,120	-			+1.0
5,754,120	-			+0.4
5,754,120	-			-1.9
5,754,120	-			-0.2
5,754,120	-			-1.6
5,754,120	-			+0.4
5,754,120	-			-0.3
5,754,120	-			+0.2
5,754,120	-			-0.6
5,754,120	-			+0.1
5,754,120	-			-0.2
5,754,120	-			-0.3
5,754,120	-			+0.1
5,754,120	-			+0.4
5,754,120	-			-0.2
5,754,120	-			-0.3
5,754,120	-			+1.4
5,754,123	+			+0.2
5,754,123	+			+0.9
5,754,123	+			+1.7
5,754,123	+			-0.6
5,754,123	+			-0.7
5,754,123	+			-1.0
5,754,124	-			+0.2
5,754,124	-			+0.7
5,754,124	-			-0.6
5,754,124	-			-0.3
5,754,124	-			-1.6
5,754,124	-			-0.6
5,754,124	-			-0.7
5,754,178	-	AO353_26140	0.19	+0.8
5,754,178	-	AO353_26140	0.19	-0.8
5,754,178	-	AO353_26140	0.19	-0.2
5,754,178	-	AO353_26140	0.19	+0.7
5,754,178	-	AO353_26140	0.19	-0.9
5,754,221	+	AO353_26140	0.29	+1.4
5,754,221	+	AO353_26140	0.29	+0.8
5,754,222	-	AO353_26140	0.29	+1.1
5,754,222	-	AO353_26140	0.29	-1.2
5,754,222	-	AO353_26140	0.29	-0.3
5,754,233	+	AO353_26140	0.32	+3.6
5,754,235	+	AO353_26140	0.32	+1.0
5,754,236	-	AO353_26140	0.32	-0.2
5,754,236	-	AO353_26140	0.32	+1.7
5,754,271	+	AO353_26140	0.41	-0.6
5,754,271	+	AO353_26140	0.41	+1.0
5,754,271	+	AO353_26140	0.41	-1.3
5,754,272	-	AO353_26140	0.41	+0.8
5,754,272	-	AO353_26140	0.41	-0.9
5,754,272	-	AO353_26140	0.41	+0.4
5,754,272	-	AO353_26140	0.41	+0.2
5,754,315	-	AO353_26140	0.51	-0.7
5,754,372	+	AO353_26140	0.65	-0.2
5,754,373	-	AO353_26140	0.65	+0.4
5,754,373	-	AO353_26140	0.65	-1.2
5,754,373	-	AO353_26140	0.65	+0.4
5,754,389	-	AO353_26140	0.69	+1.2
5,754,412	+	AO353_26140	0.74	+0.3
5,754,452	+	AO353_26140	0.83	+0.4
5,754,452	+	AO353_26140	0.83	-0.1
5,754,452	+	AO353_26140	0.83	+1.0
5,754,453	-	AO353_26140	0.84	-0.6
5,754,453	-	AO353_26140	0.84	-0.6
5,754,453	-	AO353_26140	0.84	-0.6
5,754,453	-	AO353_26140	0.84	+0.6
5,754,453	-	AO353_26140	0.84	-0.4
5,754,453	-	AO353_26140	0.84	+0.8
5,754,508	-			+1.4
5,754,540	+			+0.1
5,754,540	+			-0.1
5,754,540	+			-1.0
5,754,540	+			+0.4
5,754,540	+			+2.0
5,754,541	-			-0.6
5,754,541	-			+1.9
5,754,541	-			+0.4
5,754,541	-			+0.7
5,754,541	-			+1.0
5,754,542	+			+0.1
5,754,543	-			-1.9
5,754,554	-			-0.3
5,754,569	-			-1.2
5,754,590	+			-0.4
5,754,590	+			-1.6
5,754,616	+			+1.0
5,754,616	+			+0.3
5,754,671	+	AO353_26145	0.16	-0.6
5,754,672	-	AO353_26145	0.17	-0.2
5,754,672	-	AO353_26145	0.17	-0.0
5,754,687	+	AO353_26145	0.21	-0.2
5,754,688	-	AO353_26145	0.21	+1.4
5,754,688	-	AO353_26145	0.21	-0.6
5,754,708	-	AO353_26145	0.27	+0.6
5,754,708	-	AO353_26145	0.27	+0.4
5,754,708	-	AO353_26145	0.27	+0.4
5,754,765	+	AO353_26145	0.43	+0.4
5,754,787	+	AO353_26145	0.50	-1.7
5,754,799	-	AO353_26145	0.53	+0.3
5,754,805	+	AO353_26145	0.55	+1.0
5,754,805	+	AO353_26145	0.55	-0.6
5,754,805	+	AO353_26145	0.55	-0.3
5,754,806	-	AO353_26145	0.55	+0.8
5,754,806	-	AO353_26145	0.55	+0.4
5,754,806	-	AO353_26145	0.55	+0.4
5,754,806	-	AO353_26145	0.55	-0.1
5,754,835	+	AO353_26145	0.64	+1.2
5,754,891	+	AO353_26145	0.80	+0.6
5,754,931	+			-1.7
5,754,931	+			-1.4
5,754,931	+			+0.4
5,754,931	+			+0.4
5,754,932	-			-0.6
5,754,932	-			-1.4
5,754,932	-			-1.0
5,754,932	-			+0.1
5,754,932	-			-1.6
5,754,997	-			-1.6
5,754,997	-			-0.9
5,754,997	-			+1.1
5,754,997	-			-1.9
5,754,997	-			+0.4
5,755,042	-			-0.1
5,755,042	-			+0.0
5,755,042	-			-1.2
5,755,042	-			+0.9
5,755,049	+			-1.2
5,755,049	+			-1.2
5,755,050	-			+2.0
5,755,050	-			+0.3

Or see this region's nucleotide sequence