Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25810 and AO353_25815 are separated by 344 nucleotides AO353_25815 and AO353_25820 are separated by 281 nucleotides
AO353_25810: AO353_25810 - Fis family transcriptional regulator, at 5,688,313 to 5,689,638
_25810
AO353_25815: AO353_25815 - hypothetical protein, at 5,689,983 to 5,690,249
_25815
AO353_25820: AO353_25820 - hypothetical protein, at 5,690,531 to 5,691,820
_25820
Position (kb) 5689
5690
5691 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5689.077 kb on + strand, within AO353_25810 at 5689.078 kb on - strand, within AO353_25810 at 5689.078 kb on - strand, within AO353_25810 at 5689.336 kb on - strand, within AO353_25810 at 5689.336 kb on - strand, within AO353_25810 at 5689.336 kb on - strand, within AO353_25810 at 5689.480 kb on - strand, within AO353_25810 at 5689.480 kb on - strand, within AO353_25810 at 5689.530 kb on + strand at 5689.531 kb on - strand at 5689.531 kb on - strand at 5689.558 kb on - strand at 5689.573 kb on + strand at 5689.607 kb on - strand at 5689.703 kb on + strand at 5689.704 kb on - strand at 5689.733 kb on + strand at 5689.734 kb on - strand at 5689.741 kb on - strand at 5689.743 kb on + strand at 5689.743 kb on + strand at 5689.743 kb on + strand at 5689.744 kb on - strand at 5689.744 kb on - strand at 5689.747 kb on - strand at 5689.747 kb on - strand at 5689.747 kb on - strand at 5689.763 kb on - strand at 5689.769 kb on + strand at 5689.782 kb on + strand at 5689.846 kb on + strand at 5689.847 kb on - strand at 5689.848 kb on + strand at 5689.849 kb on - strand at 5689.909 kb on + strand at 5689.910 kb on - strand at 5689.910 kb on - strand at 5689.910 kb on - strand at 5689.915 kb on + strand at 5689.915 kb on + strand at 5689.916 kb on - strand at 5689.916 kb on - strand at 5690.037 kb on - strand, within AO353_25815 at 5690.151 kb on + strand, within AO353_25815 at 5690.151 kb on + strand, within AO353_25815 at 5690.151 kb on + strand, within AO353_25815 at 5690.151 kb on + strand, within AO353_25815 at 5690.151 kb on + strand, within AO353_25815 at 5690.151 kb on + strand, within AO353_25815 at 5690.151 kb on + strand, within AO353_25815 at 5690.152 kb on - strand, within AO353_25815 at 5690.152 kb on - strand, within AO353_25815 at 5690.152 kb on - strand, within AO353_25815 at 5690.152 kb on - strand, within AO353_25815 at 5690.296 kb on + strand at 5690.361 kb on + strand at 5690.361 kb on + strand at 5690.361 kb on + strand at 5690.361 kb on + strand at 5690.362 kb on - strand at 5690.363 kb on + strand at 5690.363 kb on + strand at 5690.363 kb on + strand at 5690.364 kb on - strand at 5690.470 kb on + strand at 5690.647 kb on + strand at 5690.647 kb on + strand at 5690.648 kb on - strand at 5690.648 kb on - strand at 5690.742 kb on + strand, within AO353_25820 at 5690.743 kb on - strand, within AO353_25820 at 5690.879 kb on + strand, within AO353_25820 at 5691.101 kb on + strand, within AO353_25820 at 5691.102 kb on - strand, within AO353_25820 at 5691.212 kb on - strand, within AO353_25820
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,689,077 + AO353_25810 0.58 -0.1 5,689,078 - AO353_25810 0.58 -1.4 5,689,078 - AO353_25810 0.58 -1.3 5,689,336 - AO353_25810 0.77 -0.1 5,689,336 - AO353_25810 0.77 +0.4 5,689,336 - AO353_25810 0.77 -0.4 5,689,480 - AO353_25810 0.88 +2.0 5,689,480 - AO353_25810 0.88 +0.4 5,689,530 + -0.6 5,689,531 - -0.4 5,689,531 - -2.2 5,689,558 - +0.9 5,689,573 + -0.1 5,689,607 - +0.7 5,689,703 + +0.8 5,689,704 - -0.1 5,689,733 + -0.1 5,689,734 - -1.3 5,689,741 - +0.4 5,689,743 + -0.1 5,689,743 + -0.1 5,689,743 + -0.8 5,689,744 - +0.9 5,689,744 - +0.6 5,689,747 - +0.3 5,689,747 - -0.2 5,689,747 - +1.2 5,689,763 - -0.9 5,689,769 + +0.4 5,689,782 + -0.2 5,689,846 + -0.8 5,689,847 - -0.8 5,689,848 + -0.4 5,689,849 - -0.3 5,689,909 + +1.0 5,689,910 - -0.2 5,689,910 - -0.7 5,689,910 - -1.3 5,689,915 + -0.1 5,689,915 + -1.6 5,689,916 - +2.2 5,689,916 - +0.5 5,690,037 - AO353_25815 0.20 -2.4 5,690,151 + AO353_25815 0.63 -0.8 5,690,151 + AO353_25815 0.63 -1.2 5,690,151 + AO353_25815 0.63 -0.6 5,690,151 + AO353_25815 0.63 -1.2 5,690,151 + AO353_25815 0.63 -0.8 5,690,151 + AO353_25815 0.63 -0.3 5,690,151 + AO353_25815 0.63 -2.4 5,690,152 - AO353_25815 0.63 +0.4 5,690,152 - AO353_25815 0.63 -1.6 5,690,152 - AO353_25815 0.63 +1.4 5,690,152 - AO353_25815 0.63 +0.4 5,690,296 + -1.0 5,690,361 + +0.4 5,690,361 + +1.2 5,690,361 + +0.0 5,690,361 + -0.2 5,690,362 - +1.3 5,690,363 + +0.4 5,690,363 + +0.3 5,690,363 + -0.8 5,690,364 - +0.1 5,690,470 + -0.3 5,690,647 + -1.2 5,690,647 + +1.4 5,690,648 - -0.9 5,690,648 - +0.8 5,690,742 + AO353_25820 0.16 -2.8 5,690,743 - AO353_25820 0.16 +0.2 5,690,879 + AO353_25820 0.27 +1.2 5,691,101 + AO353_25820 0.44 -1.0 5,691,102 - AO353_25820 0.44 -1.8 5,691,212 - AO353_25820 0.53 -1.4
Or see this region's nucleotide sequence