Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24125 and AO353_24130 overlap by 8 nucleotides AO353_24130 and AO353_24135 are separated by 156 nucleotides AO353_24135 and AO353_24140 are separated by 475 nucleotides
AO353_24125: AO353_24125 - hypothetical protein, at 5,310,515 to 5,311,588
_24125
AO353_24130: AO353_24130 - hypothetical protein, at 5,311,581 to 5,311,793
_24130
AO353_24135: AO353_24135 - hypothetical protein, at 5,311,950 to 5,312,291
_24135
AO353_24140: AO353_24140 - hypothetical protein, at 5,312,767 to 5,313,243
_24140
Position (kb) 5311
5312 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5310.607 kb on + strand at 5310.608 kb on - strand at 5310.684 kb on + strand, within AO353_24125 at 5310.688 kb on + strand, within AO353_24125 at 5310.689 kb on - strand, within AO353_24125 at 5310.689 kb on - strand, within AO353_24125 at 5310.705 kb on + strand, within AO353_24125 at 5310.757 kb on + strand, within AO353_24125 at 5310.758 kb on - strand, within AO353_24125 at 5310.795 kb on + strand, within AO353_24125 at 5310.861 kb on + strand, within AO353_24125 at 5310.928 kb on - strand, within AO353_24125 at 5310.938 kb on + strand, within AO353_24125 at 5310.950 kb on - strand, within AO353_24125 at 5310.971 kb on - strand, within AO353_24125 at 5311.041 kb on + strand, within AO353_24125 at 5311.042 kb on - strand, within AO353_24125 at 5311.069 kb on + strand, within AO353_24125 at 5311.076 kb on + strand at 5311.105 kb on + strand, within AO353_24125 at 5311.117 kb on + strand, within AO353_24125 at 5311.117 kb on + strand, within AO353_24125 at 5311.247 kb on + strand, within AO353_24125 at 5311.251 kb on + strand, within AO353_24125 at 5311.251 kb on + strand, within AO353_24125 at 5311.252 kb on - strand, within AO353_24125 at 5311.252 kb on - strand at 5311.328 kb on - strand, within AO353_24125 at 5311.346 kb on + strand, within AO353_24125 at 5311.539 kb on + strand at 5311.546 kb on - strand at 5311.553 kb on - strand at 5311.557 kb on - strand at 5311.675 kb on + strand, within AO353_24130 at 5311.677 kb on + strand, within AO353_24130 at 5311.677 kb on + strand, within AO353_24130 at 5311.678 kb on - strand, within AO353_24130 at 5311.682 kb on + strand, within AO353_24130 at 5311.808 kb on + strand at 5311.808 kb on + strand at 5311.812 kb on + strand at 5311.830 kb on + strand at 5311.830 kb on + strand at 5311.846 kb on - strand at 5312.006 kb on - strand, within AO353_24135 at 5312.006 kb on - strand, within AO353_24135 at 5312.114 kb on + strand, within AO353_24135 at 5312.115 kb on - strand, within AO353_24135 at 5312.115 kb on - strand, within AO353_24135 at 5312.115 kb on - strand, within AO353_24135 at 5312.243 kb on + strand, within AO353_24135 at 5312.243 kb on + strand, within AO353_24135 at 5312.243 kb on + strand, within AO353_24135 at 5312.244 kb on - strand, within AO353_24135 at 5312.258 kb on - strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.278 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.282 kb on + strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.283 kb on - strand at 5312.286 kb on + strand at 5312.286 kb on + strand at 5312.286 kb on + strand at 5312.287 kb on - strand at 5312.287 kb on - strand at 5312.287 kb on - strand at 5312.287 kb on - strand at 5312.296 kb on + strand at 5312.296 kb on + strand at 5312.296 kb on + strand at 5312.296 kb on + strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.297 kb on - strand at 5312.308 kb on + strand at 5312.308 kb on + strand at 5312.308 kb on + strand at 5312.309 kb on - strand at 5312.309 kb on - strand at 5312.326 kb on + strand at 5312.326 kb on + strand at 5312.326 kb on + strand at 5312.327 kb on - strand at 5312.327 kb on - strand at 5312.327 kb on - strand at 5312.327 kb on - strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.328 kb on + strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.329 kb on - strand at 5312.353 kb on + strand at 5312.353 kb on + strand at 5312.354 kb on - strand at 5312.354 kb on - strand at 5312.431 kb on + strand at 5312.432 kb on - strand at 5312.432 kb on - strand at 5312.462 kb on + strand at 5312.471 kb on + strand at 5312.472 kb on - strand at 5312.493 kb on + strand at 5312.493 kb on + strand at 5312.526 kb on + strand at 5312.526 kb on + strand at 5312.526 kb on + strand at 5312.527 kb on - strand at 5312.527 kb on - strand at 5312.537 kb on + strand at 5312.537 kb on + strand at 5312.537 kb on + strand at 5312.552 kb on + strand at 5312.552 kb on + strand at 5312.552 kb on + strand at 5312.573 kb on - strand at 5312.576 kb on + strand at 5312.595 kb on + strand at 5312.659 kb on - strand at 5312.659 kb on - strand at 5312.659 kb on - strand at 5312.690 kb on - strand at 5312.690 kb on - strand at 5312.713 kb on - strand at 5312.725 kb on + strand at 5312.725 kb on + strand at 5312.726 kb on - strand at 5312.728 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.766 kb on + strand at 5312.767 kb on - strand at 5312.767 kb on - strand at 5312.767 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,310,607 + -0.3 5,310,608 - -0.0 5,310,684 + AO353_24125 0.16 -0.2 5,310,688 + AO353_24125 0.16 +0.4 5,310,689 - AO353_24125 0.16 -1.4 5,310,689 - AO353_24125 0.16 +0.7 5,310,705 + AO353_24125 0.18 -0.2 5,310,757 + AO353_24125 0.23 -0.1 5,310,758 - AO353_24125 0.23 +0.2 5,310,795 + AO353_24125 0.26 -0.9 5,310,861 + AO353_24125 0.32 +0.4 5,310,928 - AO353_24125 0.38 -2.9 5,310,938 + AO353_24125 0.39 -1.5 5,310,950 - AO353_24125 0.41 +0.7 5,310,971 - AO353_24125 0.42 -1.2 5,311,041 + AO353_24125 0.49 -0.5 5,311,042 - AO353_24125 0.49 -1.4 5,311,069 + AO353_24125 0.52 +0.5 5,311,076 + +2.0 5,311,105 + AO353_24125 0.55 -0.4 5,311,117 + AO353_24125 0.56 -1.9 5,311,117 + AO353_24125 0.56 +0.4 5,311,247 + AO353_24125 0.68 -1.0 5,311,251 + AO353_24125 0.69 +0.4 5,311,251 + AO353_24125 0.69 +0.1 5,311,252 - AO353_24125 0.69 -0.1 5,311,252 - -2.2 5,311,328 - AO353_24125 0.76 -0.3 5,311,346 + AO353_24125 0.77 +0.0 5,311,539 + -0.8 5,311,546 - -0.4 5,311,553 - +0.2 5,311,557 - +0.4 5,311,675 + AO353_24130 0.44 -2.5 5,311,677 + AO353_24130 0.45 +0.7 5,311,677 + AO353_24130 0.45 -0.6 5,311,678 - AO353_24130 0.46 -1.6 5,311,682 + AO353_24130 0.47 -1.1 5,311,808 + -0.3 5,311,808 + -0.2 5,311,812 + -0.2 5,311,830 + +0.4 5,311,830 + +1.4 5,311,846 - +1.0 5,312,006 - AO353_24135 0.16 +1.0 5,312,006 - AO353_24135 0.16 -1.2 5,312,114 + AO353_24135 0.48 -0.6 5,312,115 - AO353_24135 0.48 -0.6 5,312,115 - AO353_24135 0.48 +0.0 5,312,115 - AO353_24135 0.48 -0.6 5,312,243 + AO353_24135 0.86 -0.3 5,312,243 + AO353_24135 0.86 -1.2 5,312,243 + AO353_24135 0.86 -0.4 5,312,244 - AO353_24135 0.86 -2.6 5,312,258 - +2.0 5,312,278 + +1.7 5,312,278 + -0.6 5,312,278 + +1.3 5,312,278 + -0.4 5,312,278 + +0.4 5,312,278 + +1.6 5,312,282 + +1.0 5,312,282 + +1.7 5,312,282 + -0.5 5,312,282 + +0.1 5,312,282 + -0.2 5,312,282 + -0.7 5,312,282 + +0.8 5,312,282 + -0.2 5,312,282 + +0.4 5,312,283 - +0.1 5,312,283 - +2.4 5,312,283 - +1.7 5,312,283 - +0.4 5,312,283 - -0.6 5,312,283 - -0.6 5,312,286 + +0.8 5,312,286 + +1.1 5,312,286 + -1.4 5,312,287 - +2.0 5,312,287 - -0.3 5,312,287 - +0.2 5,312,287 - +0.9 5,312,296 + +0.4 5,312,296 + +0.1 5,312,296 + -0.4 5,312,296 + +2.7 5,312,297 - +2.2 5,312,297 - +0.8 5,312,297 - +0.0 5,312,297 - +0.0 5,312,297 - -0.3 5,312,308 + -0.5 5,312,308 + -0.3 5,312,308 + +1.7 5,312,309 - +0.4 5,312,309 - +1.2 5,312,326 + -0.6 5,312,326 + +0.3 5,312,326 + -0.6 5,312,327 - +1.4 5,312,327 - +0.0 5,312,327 - +2.0 5,312,327 - +0.0 5,312,328 + -2.6 5,312,328 + -0.3 5,312,328 + -0.8 5,312,328 + +0.4 5,312,328 + +0.8 5,312,328 + +0.1 5,312,328 + +0.8 5,312,328 + +0.0 5,312,328 + +0.0 5,312,328 + +0.3 5,312,328 + -0.8 5,312,328 + +2.0 5,312,328 + -0.7 5,312,328 + +0.0 5,312,329 - +0.2 5,312,329 - +0.4 5,312,329 - -0.6 5,312,329 - +0.7 5,312,329 - +0.4 5,312,329 - -0.2 5,312,329 - +2.7 5,312,329 - -0.5 5,312,329 - -0.9 5,312,329 - +0.0 5,312,329 - -0.8 5,312,329 - -1.3 5,312,329 - -0.1 5,312,329 - +1.4 5,312,353 + +0.4 5,312,353 + -0.6 5,312,354 - +0.7 5,312,354 - -0.2 5,312,431 + +0.8 5,312,432 - -1.4 5,312,432 - -0.4 5,312,462 + +1.4 5,312,471 + -0.7 5,312,472 - -0.9 5,312,493 + -0.4 5,312,493 + -2.4 5,312,526 + +0.2 5,312,526 + -0.6 5,312,526 + -1.0 5,312,527 - -1.4 5,312,527 - -1.2 5,312,537 + -0.7 5,312,537 + +1.1 5,312,537 + +3.0 5,312,552 + +1.0 5,312,552 + +1.0 5,312,552 + -0.6 5,312,573 - +0.7 5,312,576 + +0.0 5,312,595 + -0.6 5,312,659 - -0.6 5,312,659 - +0.4 5,312,659 - -0.3 5,312,690 - -1.4 5,312,690 - -1.2 5,312,713 - -0.6 5,312,725 + +3.0 5,312,725 + +1.4 5,312,726 - +0.4 5,312,728 + -1.3 5,312,766 + -0.4 5,312,766 + +1.4 5,312,766 + +1.0 5,312,766 + +1.3 5,312,766 + -0.3 5,312,766 + +0.4 5,312,766 + +0.6 5,312,766 + -0.6 5,312,767 - -0.6 5,312,767 - +0.7 5,312,767 - +0.5
Or see this region's nucleotide sequence