Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14730 and AO353_14735 are separated by 3 nucleotides AO353_14735 and AO353_14740 are separated by 73 nucleotides AO353_14740 and AO353_14745 are separated by 23 nucleotides AO353_14745 and AO353_14750 are separated by 169 nucleotides
AO353_14730: AO353_14730 - hypothetical protein, at 3,265,280 to 3,265,723
_14730
AO353_14735: AO353_14735 - hypothetical protein, at 3,265,727 to 3,266,314
_14735
AO353_14740: AO353_14740 - GTP-binding protein, at 3,266,388 to 3,267,488
_14740
AO353_14745: AO353_14745 - peptidyl-tRNA hydrolase, at 3,267,512 to 3,268,096
_14745
AO353_14750: AO353_14750 - 50S ribosomal protein L25, at 3,268,266 to 3,268,865
_14750
Position (kb)
3266
3267
3268 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.553 kb on + strand, within AO353_14730 at 3265.554 kb on - strand, within AO353_14730 at 3265.554 kb on - strand, within AO353_14730 at 3265.554 kb on - strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.556 kb on + strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.557 kb on - strand, within AO353_14730 at 3265.636 kb on + strand, within AO353_14730 at 3265.636 kb on + strand, within AO353_14730 at 3265.637 kb on - strand, within AO353_14730 at 3265.668 kb on + strand, within AO353_14730 at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.711 kb on + strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.712 kb on - strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.733 kb on + strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.734 kb on - strand at 3265.951 kb on + strand, within AO353_14735 at 3265.951 kb on + strand, within AO353_14735 at 3265.951 kb on + strand, within AO353_14735 at 3265.952 kb on - strand, within AO353_14735 at 3265.952 kb on - strand, within AO353_14735 at 3265.952 kb on - strand, within AO353_14735 at 3265.960 kb on - strand, within AO353_14735 at 3266.069 kb on + strand, within AO353_14735 at 3266.069 kb on + strand, within AO353_14735 at 3266.069 kb on + strand, within AO353_14735 at 3266.070 kb on - strand, within AO353_14735 at 3266.070 kb on - strand, within AO353_14735 at 3266.071 kb on + strand, within AO353_14735 at 3266.071 kb on + strand, within AO353_14735 at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.294 kb on + strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.295 kb on - strand at 3266.304 kb on - strand at 3266.304 kb on - strand at 3266.304 kb on - strand at 3266.312 kb on + strand at 3266.312 kb on + strand at 3266.313 kb on - strand at 3266.323 kb on - strand at 3266.323 kb on - strand at 3266.334 kb on - strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.335 kb on + strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.336 kb on - strand at 3266.389 kb on + strand at 3266.390 kb on - strand at 3266.434 kb on + strand at 3266.435 kb on - strand at 3266.435 kb on - strand at 3266.435 kb on - strand at 3266.435 kb on - strand at 3266.491 kb on + strand at 3266.491 kb on + strand at 3266.509 kb on + strand, within AO353_14740 at 3266.510 kb on - strand, within AO353_14740 at 3266.872 kb on + strand, within AO353_14740 at 3266.872 kb on + strand, within AO353_14740 at 3266.872 kb on + strand, within AO353_14740 at 3266.873 kb on - strand, within AO353_14740 at 3266.873 kb on - strand, within AO353_14740 at 3266.873 kb on - strand, within AO353_14740 at 3267.456 kb on - strand at 3267.508 kb on - strand at 3267.508 kb on - strand at 3267.508 kb on - strand at 3267.508 kb on - strand at 3267.508 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,265,553 + AO353_14730 0.61 +1.0 3,265,553 + AO353_14730 0.61 +0.5 3,265,553 + AO353_14730 0.61 +0.2 3,265,553 + AO353_14730 0.61 +0.9 3,265,553 + AO353_14730 0.61 -1.0 3,265,553 + AO353_14730 0.61 +0.1 3,265,553 + AO353_14730 0.61 +0.0 3,265,553 + AO353_14730 0.61 -0.7 3,265,553 + AO353_14730 0.61 +0.5 3,265,553 + AO353_14730 0.61 -0.5 3,265,553 + AO353_14730 0.61 -0.4 3,265,553 + AO353_14730 0.61 -1.7 3,265,554 - AO353_14730 0.62 -0.5 3,265,554 - AO353_14730 0.62 -1.5 3,265,554 - AO353_14730 0.62 -0.4 3,265,556 + AO353_14730 0.62 -0.1 3,265,556 + AO353_14730 0.62 -2.1 3,265,556 + AO353_14730 0.62 -2.1 3,265,556 + AO353_14730 0.62 +2.4 3,265,556 + AO353_14730 0.62 +1.9 3,265,556 + AO353_14730 0.62 +0.1 3,265,556 + AO353_14730 0.62 -0.4 3,265,556 + AO353_14730 0.62 -0.1 3,265,557 - AO353_14730 0.62 -0.9 3,265,557 - AO353_14730 0.62 -0.5 3,265,557 - AO353_14730 0.62 -0.2 3,265,557 - AO353_14730 0.62 +0.6 3,265,557 - AO353_14730 0.62 -1.4 3,265,636 + AO353_14730 0.80 +2.1 3,265,636 + AO353_14730 0.80 +0.7 3,265,637 - AO353_14730 0.80 +1.1 3,265,668 + AO353_14730 0.87 +0.6 3,265,711 + -0.9 3,265,711 + +0.9 3,265,711 + +0.1 3,265,711 + -0.9 3,265,711 + +0.5 3,265,711 + -1.9 3,265,711 + -0.9 3,265,712 - -0.5 3,265,712 - -1.1 3,265,712 - -0.7 3,265,712 - +0.2 3,265,712 - +0.4 3,265,712 - -1.7 3,265,733 + -0.2 3,265,733 + -0.4 3,265,733 + -0.0 3,265,733 + +0.5 3,265,733 + -0.4 3,265,733 + +0.4 3,265,733 + +0.6 3,265,733 + -0.7 3,265,733 + -0.7 3,265,733 + +0.2 3,265,733 + -1.5 3,265,733 + -0.6 3,265,733 + -1.1 3,265,733 + -0.2 3,265,734 - +2.1 3,265,734 - -0.7 3,265,734 - +0.6 3,265,734 - +1.2 3,265,734 - -0.4 3,265,734 - +0.1 3,265,734 - +0.5 3,265,734 - -0.2 3,265,734 - -0.1 3,265,734 - +0.2 3,265,734 - -1.1 3,265,734 - +0.5 3,265,734 - -0.3 3,265,734 - +0.8 3,265,951 + AO353_14735 0.38 -1.7 3,265,951 + AO353_14735 0.38 -0.7 3,265,951 + AO353_14735 0.38 +1.7 3,265,952 - AO353_14735 0.38 +0.8 3,265,952 - AO353_14735 0.38 -2.4 3,265,952 - AO353_14735 0.38 -0.2 3,265,960 - AO353_14735 0.40 -1.2 3,266,069 + AO353_14735 0.58 -0.4 3,266,069 + AO353_14735 0.58 +1.7 3,266,069 + AO353_14735 0.58 +0.6 3,266,070 - AO353_14735 0.58 +1.0 3,266,070 - AO353_14735 0.58 +1.8 3,266,071 + AO353_14735 0.59 +0.9 3,266,071 + AO353_14735 0.59 -0.5 3,266,294 + -0.3 3,266,294 + -0.0 3,266,294 + +1.3 3,266,294 + +0.3 3,266,294 + +1.1 3,266,294 + +0.1 3,266,295 - +1.3 3,266,295 - +1.3 3,266,295 - -0.3 3,266,295 - -1.3 3,266,295 - +0.5 3,266,295 - -1.5 3,266,304 - +0.3 3,266,304 - +0.3 3,266,304 - +0.7 3,266,312 + -0.9 3,266,312 + +1.9 3,266,313 - -1.2 3,266,323 - -0.1 3,266,323 - -0.2 3,266,334 - +1.8 3,266,335 + +1.7 3,266,335 + +0.3 3,266,335 + +2.5 3,266,335 + -2.9 3,266,335 + -1.2 3,266,335 + -0.5 3,266,335 + +0.1 3,266,335 + +0.6 3,266,336 - +0.1 3,266,336 - -0.2 3,266,336 - +0.7 3,266,336 - +1.1 3,266,336 - -0.0 3,266,389 + -0.5 3,266,390 - +0.7 3,266,434 + -1.9 3,266,435 - -1.7 3,266,435 - -0.9 3,266,435 - -1.5 3,266,435 - -1.5 3,266,491 + -1.4 3,266,491 + +1.1 3,266,509 + AO353_14740 0.11 -1.1 3,266,510 - AO353_14740 0.11 +0.7 3,266,872 + AO353_14740 0.44 -1.7 3,266,872 + AO353_14740 0.44 +0.1 3,266,872 + AO353_14740 0.44 -1.5 3,266,873 - AO353_14740 0.44 -0.5 3,266,873 - AO353_14740 0.44 -0.1 3,266,873 - AO353_14740 0.44 -0.4 3,267,456 - -2.4 3,267,508 - +1.8 3,267,508 - -2.6 3,267,508 - +0.6 3,267,508 - +0.5 3,267,508 - -0.2
Or see this region's nucleotide sequence