Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08640 and AO353_08645 are separated by 73 nucleotides AO353_08645 and AO353_08650 are separated by 33 nucleotides AO353_08650 and AO353_08655 overlap by 4 nucleotides
AO353_08640: AO353_08640 - hypothetical protein, at 1,899,248 to 1,899,976
_08640
AO353_08645: AO353_08645 - transporter, at 1,900,050 to 1,900,265
_08645
AO353_08650: AO353_08650 - aliphatic sulfonate ABC transporter ATP-binding protein, at 1,900,299 to 1,901,105
_08650
AO353_08655: AO353_08655 - alkanesulfonate transporter permease subunit, at 1,901,102 to 1,901,890
_08655
Position (kb)
1900
1901 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1899.155 kb on + strand at 1899.156 kb on - strand at 1899.156 kb on - strand at 1899.156 kb on - strand at 1899.195 kb on + strand at 1899.195 kb on + strand at 1899.247 kb on + strand at 1899.256 kb on - strand at 1899.256 kb on - strand at 1899.357 kb on - strand, within AO353_08640 at 1899.431 kb on + strand, within AO353_08640 at 1899.432 kb on - strand, within AO353_08640 at 1899.741 kb on + strand, within AO353_08640 at 1899.830 kb on + strand, within AO353_08640 at 1899.850 kb on - strand, within AO353_08640 at 1899.856 kb on + strand, within AO353_08640 at 1899.892 kb on + strand, within AO353_08640 at 1899.892 kb on + strand, within AO353_08640 at 1899.913 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.931 kb on + strand at 1899.932 kb on - strand at 1899.932 kb on - strand at 1899.932 kb on - strand at 1899.932 kb on - strand at 1899.932 kb on - strand at 1899.932 kb on - strand at 1899.932 kb on - strand at 1899.934 kb on - strand at 1899.963 kb on + strand at 1899.999 kb on + strand at 1899.999 kb on + strand at 1899.999 kb on + strand at 1900.000 kb on - strand at 1900.000 kb on - strand at 1900.000 kb on - strand at 1900.220 kb on + strand, within AO353_08645 at 1900.220 kb on + strand, within AO353_08645 at 1900.220 kb on + strand, within AO353_08645 at 1900.220 kb on + strand, within AO353_08645 at 1900.544 kb on + strand, within AO353_08650 at 1900.544 kb on + strand, within AO353_08650 at 1900.544 kb on + strand, within AO353_08650 at 1900.545 kb on - strand, within AO353_08650 at 1900.545 kb on - strand, within AO353_08650 at 1900.943 kb on + strand, within AO353_08650 at 1900.943 kb on + strand, within AO353_08650 at 1900.943 kb on + strand, within AO353_08650 at 1900.944 kb on - strand, within AO353_08650 at 1900.944 kb on - strand, within AO353_08650 at 1900.944 kb on - strand, within AO353_08650 at 1900.944 kb on - strand, within AO353_08650 at 1900.950 kb on - strand, within AO353_08650 at 1901.120 kb on - strand at 1901.130 kb on + strand at 1901.205 kb on + strand, within AO353_08655
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,899,155 + -0.0 1,899,156 - +0.0 1,899,156 - +0.1 1,899,156 - +1.3 1,899,195 + -0.3 1,899,195 + -0.4 1,899,247 + -0.7 1,899,256 - +0.9 1,899,256 - -0.5 1,899,357 - AO353_08640 0.15 +0.9 1,899,431 + AO353_08640 0.25 -0.1 1,899,432 - AO353_08640 0.25 +0.8 1,899,741 + AO353_08640 0.68 +1.7 1,899,830 + AO353_08640 0.80 -1.7 1,899,850 - AO353_08640 0.83 +2.3 1,899,856 + AO353_08640 0.83 +1.3 1,899,892 + AO353_08640 0.88 -2.0 1,899,892 + AO353_08640 0.88 -1.0 1,899,913 + +0.6 1,899,931 + +1.0 1,899,931 + -0.9 1,899,931 + +1.0 1,899,931 + -0.4 1,899,931 + +0.3 1,899,931 + -0.3 1,899,931 + -0.0 1,899,931 + +2.5 1,899,931 + -0.4 1,899,931 + -1.0 1,899,932 - +0.4 1,899,932 - +0.3 1,899,932 - +0.4 1,899,932 - +0.2 1,899,932 - +0.1 1,899,932 - +0.4 1,899,932 - +0.3 1,899,934 - -0.4 1,899,963 + +1.0 1,899,999 + -1.3 1,899,999 + -0.0 1,899,999 + +0.1 1,900,000 - -0.3 1,900,000 - +0.6 1,900,000 - +0.1 1,900,220 + AO353_08645 0.79 -1.0 1,900,220 + AO353_08645 0.79 +0.3 1,900,220 + AO353_08645 0.79 -0.3 1,900,220 + AO353_08645 0.79 -1.3 1,900,544 + AO353_08650 0.30 +0.1 1,900,544 + AO353_08650 0.30 +0.4 1,900,544 + AO353_08650 0.30 -0.5 1,900,545 - AO353_08650 0.30 -2.0 1,900,545 - AO353_08650 0.30 +0.2 1,900,943 + AO353_08650 0.80 +0.3 1,900,943 + AO353_08650 0.80 +2.3 1,900,943 + AO353_08650 0.80 +0.1 1,900,944 - AO353_08650 0.80 +1.8 1,900,944 - AO353_08650 0.80 -0.5 1,900,944 - AO353_08650 0.80 -1.3 1,900,944 - AO353_08650 0.80 +0.7 1,900,950 - AO353_08650 0.81 +0.5 1,901,120 - +0.5 1,901,130 + +1.3 1,901,205 + AO353_08655 0.13 -1.6
Or see this region's nucleotide sequence