Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08420 and AO353_08425 are separated by 85 nucleotides AO353_08425 and AO353_08430 overlap by 4 nucleotides
AO353_08420: AO353_08420 - ATPase P, at 1,851,627 to 1,853,918
_08420
AO353_08425: AO353_08425 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 1,854,004 to 1,854,453
_08425
AO353_08430: AO353_08430 - MFS transporter, at 1,854,450 to 1,855,631
_08430
Position (kb)
1854
1855 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.022 kb on + strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.023 kb on - strand, within AO353_08420 at 1853.084 kb on + strand, within AO353_08420 at 1853.084 kb on + strand, within AO353_08420 at 1853.085 kb on - strand, within AO353_08420 at 1853.085 kb on - strand, within AO353_08420 at 1853.085 kb on - strand, within AO353_08420 at 1853.090 kb on + strand, within AO353_08420 at 1853.090 kb on + strand, within AO353_08420 at 1853.090 kb on + strand, within AO353_08420 at 1853.090 kb on + strand, within AO353_08420 at 1853.090 kb on + strand, within AO353_08420 at 1853.091 kb on - strand, within AO353_08420 at 1853.091 kb on - strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.344 kb on + strand, within AO353_08420 at 1853.345 kb on - strand, within AO353_08420 at 1853.345 kb on - strand, within AO353_08420 at 1853.345 kb on - strand, within AO353_08420 at 1853.345 kb on - strand, within AO353_08420 at 1853.345 kb on - strand, within AO353_08420 at 1853.345 kb on - strand, within AO353_08420 at 1853.605 kb on - strand, within AO353_08420 at 1853.918 kb on + strand at 1853.918 kb on + strand at 1853.918 kb on + strand at 1853.918 kb on + strand at 1853.918 kb on + strand at 1853.919 kb on - strand at 1853.919 kb on - strand at 1853.919 kb on - strand at 1853.919 kb on - strand at 1853.919 kb on - strand at 1853.973 kb on - strand at 1854.059 kb on - strand, within AO353_08425 at 1854.061 kb on + strand, within AO353_08425 at 1854.061 kb on + strand, within AO353_08425 at 1854.061 kb on + strand, within AO353_08425 at 1854.061 kb on + strand, within AO353_08425 at 1854.062 kb on - strand, within AO353_08425 at 1854.062 kb on - strand, within AO353_08425 at 1854.062 kb on - strand, within AO353_08425 at 1854.062 kb on - strand, within AO353_08425 at 1854.118 kb on + strand, within AO353_08425 at 1854.118 kb on + strand, within AO353_08425 at 1854.118 kb on + strand, within AO353_08425 at 1854.118 kb on + strand, within AO353_08425 at 1854.118 kb on + strand, within AO353_08425 at 1854.118 kb on + strand, within AO353_08425 at 1854.118 kb on + strand, within AO353_08425 at 1854.119 kb on - strand, within AO353_08425 at 1854.119 kb on - strand, within AO353_08425 at 1854.150 kb on + strand, within AO353_08425 at 1854.150 kb on + strand, within AO353_08425 at 1854.150 kb on + strand, within AO353_08425 at 1854.151 kb on - strand, within AO353_08425 at 1854.151 kb on - strand, within AO353_08425 at 1854.151 kb on - strand, within AO353_08425 at 1854.151 kb on - strand, within AO353_08425 at 1854.157 kb on - strand, within AO353_08425 at 1854.451 kb on + strand at 1854.452 kb on - strand at 1854.466 kb on - strand at 1854.638 kb on + strand, within AO353_08430 at 1854.645 kb on + strand, within AO353_08430 at 1854.645 kb on + strand, within AO353_08430 at 1854.645 kb on + strand, within AO353_08430 at 1854.646 kb on - strand, within AO353_08430 at 1854.646 kb on - strand, within AO353_08430 at 1854.775 kb on - strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.841 kb on + strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.842 kb on - strand, within AO353_08430 at 1854.854 kb on + strand, within AO353_08430 at 1854.854 kb on + strand, within AO353_08430 at 1854.854 kb on + strand, within AO353_08430 at 1854.854 kb on + strand, within AO353_08430 at 1854.854 kb on + strand, within AO353_08430 at 1854.854 kb on + strand, within AO353_08430 at 1854.854 kb on + strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.855 kb on - strand, within AO353_08430 at 1854.944 kb on + strand, within AO353_08430 at 1854.945 kb on - strand, within AO353_08430 at 1854.945 kb on - strand, within AO353_08430 at 1855.059 kb on + strand, within AO353_08430 at 1855.059 kb on + strand, within AO353_08430 at 1855.060 kb on - strand, within AO353_08430 at 1855.060 kb on - strand, within AO353_08430 at 1855.060 kb on - strand, within AO353_08430 at 1855.060 kb on - strand, within AO353_08430 at 1855.204 kb on - strand, within AO353_08430 at 1855.239 kb on + strand, within AO353_08430 at 1855.240 kb on - strand, within AO353_08430 at 1855.240 kb on - strand, within AO353_08430 at 1855.240 kb on - strand, within AO353_08430 at 1855.240 kb on - strand, within AO353_08430 at 1855.373 kb on - strand, within AO353_08430 at 1855.380 kb on + strand, within AO353_08430 at 1855.406 kb on + strand, within AO353_08430
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,853,022 + AO353_08420 0.61 +0.2 1,853,022 + AO353_08420 0.61 +0.7 1,853,022 + AO353_08420 0.61 +1.3 1,853,022 + AO353_08420 0.61 -1.5 1,853,022 + AO353_08420 0.61 -1.5 1,853,022 + AO353_08420 0.61 -0.7 1,853,022 + AO353_08420 0.61 +0.6 1,853,022 + AO353_08420 0.61 -0.3 1,853,022 + AO353_08420 0.61 +0.0 1,853,023 - AO353_08420 0.61 +2.1 1,853,023 - AO353_08420 0.61 +0.7 1,853,023 - AO353_08420 0.61 +2.3 1,853,023 - AO353_08420 0.61 +0.3 1,853,023 - AO353_08420 0.61 +1.3 1,853,023 - AO353_08420 0.61 +1.0 1,853,023 - AO353_08420 0.61 -1.3 1,853,023 - AO353_08420 0.61 +1.0 1,853,023 - AO353_08420 0.61 +0.1 1,853,023 - AO353_08420 0.61 +1.0 1,853,023 - AO353_08420 0.61 +0.3 1,853,023 - AO353_08420 0.61 +1.6 1,853,023 - AO353_08420 0.61 -0.3 1,853,023 - AO353_08420 0.61 -1.2 1,853,023 - AO353_08420 0.61 +1.0 1,853,023 - AO353_08420 0.61 +0.7 1,853,023 - AO353_08420 0.61 +0.0 1,853,084 + AO353_08420 0.64 +0.7 1,853,084 + AO353_08420 0.64 -0.4 1,853,085 - AO353_08420 0.64 +0.3 1,853,085 - AO353_08420 0.64 +0.5 1,853,085 - AO353_08420 0.64 +1.7 1,853,090 + AO353_08420 0.64 +0.7 1,853,090 + AO353_08420 0.64 -0.4 1,853,090 + AO353_08420 0.64 +0.6 1,853,090 + AO353_08420 0.64 +0.1 1,853,090 + AO353_08420 0.64 -0.3 1,853,091 - AO353_08420 0.64 +1.0 1,853,091 - AO353_08420 0.64 +0.3 1,853,344 + AO353_08420 0.75 -0.7 1,853,344 + AO353_08420 0.75 +0.1 1,853,344 + AO353_08420 0.75 +0.3 1,853,344 + AO353_08420 0.75 -0.2 1,853,344 + AO353_08420 0.75 +0.2 1,853,344 + AO353_08420 0.75 -0.4 1,853,344 + AO353_08420 0.75 -0.8 1,853,344 + AO353_08420 0.75 +0.9 1,853,344 + AO353_08420 0.75 -0.8 1,853,345 - AO353_08420 0.75 -1.8 1,853,345 - AO353_08420 0.75 +0.1 1,853,345 - AO353_08420 0.75 +0.2 1,853,345 - AO353_08420 0.75 +1.7 1,853,345 - AO353_08420 0.75 -0.3 1,853,345 - AO353_08420 0.75 +0.2 1,853,605 - AO353_08420 0.86 -1.0 1,853,918 + -0.7 1,853,918 + -0.9 1,853,918 + -0.3 1,853,918 + +0.3 1,853,918 + +0.3 1,853,919 - +0.7 1,853,919 - +0.2 1,853,919 - +0.7 1,853,919 - +1.4 1,853,919 - +0.3 1,853,973 - -1.3 1,854,059 - AO353_08425 0.12 -0.9 1,854,061 + AO353_08425 0.13 +0.4 1,854,061 + AO353_08425 0.13 -2.4 1,854,061 + AO353_08425 0.13 -0.6 1,854,061 + AO353_08425 0.13 +1.3 1,854,062 - AO353_08425 0.13 +1.3 1,854,062 - AO353_08425 0.13 +0.3 1,854,062 - AO353_08425 0.13 -0.7 1,854,062 - AO353_08425 0.13 -0.3 1,854,118 + AO353_08425 0.25 +0.3 1,854,118 + AO353_08425 0.25 -1.3 1,854,118 + AO353_08425 0.25 +0.5 1,854,118 + AO353_08425 0.25 -1.0 1,854,118 + AO353_08425 0.25 -0.5 1,854,118 + AO353_08425 0.25 -0.2 1,854,118 + AO353_08425 0.25 +1.6 1,854,119 - AO353_08425 0.26 -0.3 1,854,119 - AO353_08425 0.26 +0.5 1,854,150 + AO353_08425 0.32 -0.5 1,854,150 + AO353_08425 0.32 +0.3 1,854,150 + AO353_08425 0.32 -1.0 1,854,151 - AO353_08425 0.33 +0.7 1,854,151 - AO353_08425 0.33 -0.3 1,854,151 - AO353_08425 0.33 +0.3 1,854,151 - AO353_08425 0.33 -0.3 1,854,157 - AO353_08425 0.34 -0.3 1,854,451 + +0.4 1,854,452 - +1.7 1,854,466 - +0.2 1,854,638 + AO353_08430 0.16 -2.3 1,854,645 + AO353_08430 0.16 -0.5 1,854,645 + AO353_08430 0.16 +0.0 1,854,645 + AO353_08430 0.16 +1.3 1,854,646 - AO353_08430 0.17 -2.3 1,854,646 - AO353_08430 0.17 +0.7 1,854,775 - AO353_08430 0.27 -1.1 1,854,841 + AO353_08430 0.33 +0.5 1,854,841 + AO353_08430 0.33 +0.5 1,854,841 + AO353_08430 0.33 -0.0 1,854,841 + AO353_08430 0.33 -0.1 1,854,841 + AO353_08430 0.33 -0.7 1,854,841 + AO353_08430 0.33 +2.1 1,854,841 + AO353_08430 0.33 +1.3 1,854,841 + AO353_08430 0.33 +0.1 1,854,842 - AO353_08430 0.33 +0.3 1,854,842 - AO353_08430 0.33 -0.8 1,854,842 - AO353_08430 0.33 -1.5 1,854,842 - AO353_08430 0.33 -0.4 1,854,842 - AO353_08430 0.33 +0.1 1,854,842 - AO353_08430 0.33 +1.7 1,854,842 - AO353_08430 0.33 -1.1 1,854,842 - AO353_08430 0.33 +0.7 1,854,854 + AO353_08430 0.34 -0.3 1,854,854 + AO353_08430 0.34 +0.6 1,854,854 + AO353_08430 0.34 +1.3 1,854,854 + AO353_08430 0.34 -1.5 1,854,854 + AO353_08430 0.34 +0.7 1,854,854 + AO353_08430 0.34 +0.2 1,854,854 + AO353_08430 0.34 -0.6 1,854,855 - AO353_08430 0.34 +0.3 1,854,855 - AO353_08430 0.34 +0.5 1,854,855 - AO353_08430 0.34 -1.9 1,854,855 - AO353_08430 0.34 -0.5 1,854,855 - AO353_08430 0.34 -0.0 1,854,855 - AO353_08430 0.34 +1.0 1,854,855 - AO353_08430 0.34 -0.3 1,854,855 - AO353_08430 0.34 +1.2 1,854,855 - AO353_08430 0.34 +0.5 1,854,855 - AO353_08430 0.34 +0.2 1,854,944 + AO353_08430 0.42 +0.3 1,854,945 - AO353_08430 0.42 +0.5 1,854,945 - AO353_08430 0.42 +0.4 1,855,059 + AO353_08430 0.52 +1.0 1,855,059 + AO353_08430 0.52 -0.0 1,855,060 - AO353_08430 0.52 -0.3 1,855,060 - AO353_08430 0.52 -0.0 1,855,060 - AO353_08430 0.52 +0.7 1,855,060 - AO353_08430 0.52 -1.1 1,855,204 - AO353_08430 0.64 -0.1 1,855,239 + AO353_08430 0.67 -0.6 1,855,240 - AO353_08430 0.67 -0.7 1,855,240 - AO353_08430 0.67 +1.5 1,855,240 - AO353_08430 0.67 -0.3 1,855,240 - AO353_08430 0.67 -0.9 1,855,373 - AO353_08430 0.78 -1.3 1,855,380 + AO353_08430 0.79 -0.1 1,855,406 + AO353_08430 0.81 -0.3
Or see this region's nucleotide sequence