Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2023

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,091,699	+				-0.8
2,091,712	+				+0.1
2,092,013	+		Synpcc7942_2023	0.55	-4.8
2,092,018	+		Synpcc7942_2023	0.56	-2.9
2,092,160	-		Synpcc7942_2023	0.87	-4.8
2,092,375	+				-2.3
2,092,375	+				-0.8
2,092,385	+				-0.7
2,092,436	-				+1.5
2,092,454	-				-0.5
2,092,469	-				+0.0
2,092,537	+		Synpcc7942_2024	0.17	-2.9
2,092,537	+		Synpcc7942_2024	0.17	-1.1
2,092,545	-		Synpcc7942_2024	0.18	-3.3
2,092,580	+		Synpcc7942_2024	0.22	-0.9
2,092,585	+		Synpcc7942_2024	0.23	+0.8
2,092,616	+		Synpcc7942_2024	0.26	+1.0
2,092,636	-		Synpcc7942_2024	0.29	+0.9
2,092,637	-		Synpcc7942_2024	0.29	-1.9
2,092,637	-		Synpcc7942_2024	0.29	+0.6
2,092,643	-		Synpcc7942_2024	0.29	-0.5
2,092,660	-		Synpcc7942_2024	0.31	-0.1
2,092,660	-		Synpcc7942_2024	0.31	+1.0
2,092,683	-		Synpcc7942_2024	0.34	-0.1
2,092,706	+		Synpcc7942_2024	0.37	+0.6
2,092,706	+		Synpcc7942_2024	0.37	-1.1
2,092,708	+		Synpcc7942_2024	0.37	-1.7
2,092,714	-		Synpcc7942_2024	0.38	+1.1
2,092,714	-		Synpcc7942_2024	0.38	+0.5
2,092,714	-		Synpcc7942_2024	0.38	-0.9
2,092,714	-		Synpcc7942_2024	0.38	-2.4
2,092,714	-		Synpcc7942_2024	0.38	+1.4
2,092,716	+		Synpcc7942_2024	0.38	+0.9
2,092,716	+		Synpcc7942_2024	0.38	-1.1
2,092,716	+		Synpcc7942_2024	0.38	+0.5
2,092,716	+		Synpcc7942_2024	0.38	-1.7
2,092,716	+		Synpcc7942_2024	0.38	-0.1
2,092,716	+		Synpcc7942_2024	0.38	+0.3
2,092,716	+		Synpcc7942_2024	0.38	+0.2
2,092,724	-		Synpcc7942_2024	0.39	-1.1
2,092,724	-		Synpcc7942_2024	0.39	+2.0
2,092,731	+		Synpcc7942_2024	0.40	-1.1
2,092,737	+		Synpcc7942_2024	0.40	-0.1
2,092,745	-		Synpcc7942_2024	0.41	-1.9
2,092,745	-		Synpcc7942_2024	0.41	-2.1
2,092,749	+		Synpcc7942_2024	0.42	+0.3
2,092,750	-		Synpcc7942_2024	0.42	+1.2
2,092,751	-		Synpcc7942_2024	0.42	+0.3
2,092,753	+		Synpcc7942_2024	0.42	-0.1
2,092,755	+		Synpcc7942_2024	0.42	+0.6
2,092,755	+		Synpcc7942_2024	0.42	-1.5
2,092,756	+		Synpcc7942_2024	0.42	+1.5
2,092,763	-		Synpcc7942_2024	0.43	-0.1
2,092,801	-		Synpcc7942_2024	0.48	-0.5
2,092,829	-		Synpcc7942_2024	0.51	+0.9
2,092,839	-		Synpcc7942_2024	0.52	+0.1
2,092,839	-		Synpcc7942_2024	0.52	+1.3
2,092,867	+		Synpcc7942_2024	0.55	+0.9
2,092,897	-		Synpcc7942_2024	0.59	+0.3
2,092,917	+		Synpcc7942_2024	0.61	-0.2
2,092,936	+		Synpcc7942_2024	0.63	-0.1
2,092,941	+		Synpcc7942_2024	0.64	+1.2
2,092,999	+		Synpcc7942_2024	0.70	+1.3
2,093,028	+		Synpcc7942_2024	0.74	-0.1
2,093,070	+		Synpcc7942_2024	0.78	-1.7
2,093,078	-		Synpcc7942_2024	0.79	+0.5
2,093,088	-		Synpcc7942_2024	0.80	-0.1
2,093,123	-		Synpcc7942_2024	0.84	+1.2
2,093,138	+		Synpcc7942_2024	0.86	+1.4
2,093,146	-		Synpcc7942_2024	0.87	+0.2
2,093,146	-		Synpcc7942_2024	0.87	-1.3
2,093,156	-		Synpcc7942_2024	0.88	+0.9
2,093,156	-		Synpcc7942_2024	0.88	+1.5
2,093,156	-		Synpcc7942_2024	0.88	-0.1
2,093,156	-		Synpcc7942_2024	0.88	+0.8
2,093,208	+				-1.7
2,093,213	+				-0.1
2,093,216	-				+0.6
2,093,221	-				-1.1
2,093,221	-				+1.7
2,093,221	-				-0.9