Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1943

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,015,193	+		Synpcc7942_1941	0.57	+0.9
2,015,201	-		Synpcc7942_1941	0.58	-2.9
2,015,201	-		Synpcc7942_1941	0.58	+0.5
2,015,218	+		Synpcc7942_1941	0.60	-2.9
2,015,231	+		Synpcc7942_1941	0.61	+1.0
2,015,237	-		Synpcc7942_1941	0.62	+1.4
2,015,237	-		Synpcc7942_1941	0.62	-0.9
2,015,239	+		Synpcc7942_1941	0.62	-0.3
2,015,239	+		Synpcc7942_1941	0.62	+0.4
2,015,239	+		Synpcc7942_1941	0.62	-2.1
2,015,239	-		Synpcc7942_1941	0.62	+0.6
2,015,247	-		Synpcc7942_1941	0.63	-1.4
2,015,247	-		Synpcc7942_1941	0.63	+3.4
2,015,247	-		Synpcc7942_1941	0.63	-2.9
2,015,247	-		Synpcc7942_1941	0.63	-1.1
2,015,247	-		Synpcc7942_1941	0.63	+0.2
2,015,247	-		Synpcc7942_1941	0.63	-0.2
2,015,247	-		Synpcc7942_1941	0.63	+0.1
2,015,251	-		Synpcc7942_1941	0.64	+0.4
2,015,254	+		Synpcc7942_1941	0.64	-1.9
2,015,261	+		Synpcc7942_1941	0.65	+0.5
2,015,280	-		Synpcc7942_1941	0.67	-1.1
2,015,285	+		Synpcc7942_1941	0.67	+2.4
2,015,285	+		Synpcc7942_1941	0.67	+0.4
2,015,287	+		Synpcc7942_1941	0.68	-0.4
2,015,287	+		Synpcc7942_1941	0.68	+0.7
2,015,287	+		Synpcc7942_1941	0.68	-0.5
2,015,287	+		Synpcc7942_1941	0.68	+1.7
2,015,295	-		Synpcc7942_1941	0.68	+2.2
2,015,295	-		Synpcc7942_1941	0.68	+0.9
2,015,295	-		Synpcc7942_1941	0.68	+0.3
2,015,302	+		Synpcc7942_1941	0.69	+0.3
2,015,319	-		Synpcc7942_1941	0.71	-2.7
2,015,320	-		Synpcc7942_1941	0.71	+1.3
2,015,320	-		Synpcc7942_1941	0.71	+0.7
2,015,320	-		Synpcc7942_1941	0.71	+2.6
2,015,330	-		Synpcc7942_1941	0.72	-2.4
2,015,332	+		Synpcc7942_1941	0.73	-0.1
2,015,344	+		Synpcc7942_1941	0.74	+0.8
2,015,372	+		Synpcc7942_1941	0.77	-1.1
2,015,386	+		Synpcc7942_1941	0.79	-0.8
2,015,392	+		Synpcc7942_1941	0.79	+1.3
2,015,394	-		Synpcc7942_1941	0.79	-1.3
2,015,397	+		Synpcc7942_1941	0.80	+1.7
2,015,397	+		Synpcc7942_1941	0.80	+0.3
2,015,397	+		Synpcc7942_1941	0.80	-0.4
2,015,405	-		Synpcc7942_1941	0.81	+1.2
2,015,405	-				+1.5
2,015,415	-		Synpcc7942_1941	0.82	+1.7
2,015,439	+		Synpcc7942_1941	0.85	-0.7
2,015,458	+		Synpcc7942_1941	0.87	+0.9
2,015,458	-		Synpcc7942_1941	0.87	+0.6
2,015,460	+		Synpcc7942_1941	0.87	-0.1
2,015,509	-				+1.3
2,015,526	+				-0.8
2,015,526	+				+2.5
2,015,552	+				+0.3
2,015,567	-				-0.1
2,015,576	+				+0.6
2,015,581	+				-2.0
2,015,581	+				-0.2
2,015,581	+				+0.7
2,015,589	-				-0.1
2,015,600	-				+0.7
2,015,605	+				+3.2
2,015,610	+				-0.1
2,015,610	+				-1.1
2,015,610	+				-1.7
2,015,618	-				+0.5
2,015,625	-				-0.1
2,015,633	-				+0.6
2,015,669	-				-3.6
2,015,695	+	prxQ-A3	Synpcc7942_1942	0.11	-1.3
2,015,714	-	prxQ-A3	Synpcc7942_1942	0.15	+1.1
2,015,714	-	prxQ-A3	Synpcc7942_1942	0.15	+1.8
2,015,784	+	prxQ-A3	Synpcc7942_1942	0.31	-0.7
2,015,818	-	prxQ-A3	Synpcc7942_1942	0.38	-1.9
2,015,820	-	prxQ-A3	Synpcc7942_1942	0.39	-0.2
2,015,827	-	prxQ-A3	Synpcc7942_1942	0.40	+1.2
2,015,838	+	prxQ-A3	Synpcc7942_1942	0.43	+0.1
2,015,843	+	prxQ-A3	Synpcc7942_1942	0.44	+0.6
2,015,845	+	prxQ-A3	Synpcc7942_1942	0.44	+1.2
2,015,849	+	prxQ-A3	Synpcc7942_1942	0.45	+1.1
2,015,859	-	prxQ-A3	Synpcc7942_1942	0.47	+0.1
2,015,893	+	prxQ-A3	Synpcc7942_1942	0.55	+0.3
2,015,902	-	prxQ-A3	Synpcc7942_1942	0.57	+0.7
2,015,910	+	prxQ-A3	Synpcc7942_1942	0.58	-1.4
2,015,923	-	prxQ-A3	Synpcc7942_1942	0.61	+0.6
2,015,923	-	prxQ-A3	Synpcc7942_1942	0.61	+1.3
2,015,925	+	prxQ-A3	Synpcc7942_1942	0.62	-2.9
2,015,949	+	prxQ-A3	Synpcc7942_1942	0.67	+0.5
2,015,957	-	prxQ-A3	Synpcc7942_1942	0.69	+0.5
2,016,003	+	prxQ-A3	Synpcc7942_1942	0.79	-1.1
2,016,021	-	prxQ-A3	Synpcc7942_1942	0.83	-1.4
2,016,061	+				-2.1
2,016,069	-				-0.6
2,016,071	-				+0.1
2,016,091	+				+0.7
2,016,123	+				+0.4
2,016,153	+				-3.3
2,016,156	-				-0.1
2,016,249	+				-3.3
2,016,276	+				-0.1
2,016,281	+				-0.4
2,016,281	+				-1.7
2,016,289	-				-1.7
2,016,295	-				-2.7
2,016,314	+				-3.4
2,016,317	-				-1.7
2,016,322	-				-1.7
2,016,327	-				-3.6
2,016,332	-				-0.1
2,016,354	+	ftn2	Synpcc7942_1943	0.11	-2.9
2,016,360	-	ftn2	Synpcc7942_1943	0.11	-2.4
2,016,362	-	ftn2	Synpcc7942_1943	0.12	-5.1
2,016,409	-	ftn2	Synpcc7942_1943	0.14	-2.1
2,016,416	+	ftn2	Synpcc7942_1943	0.14	-0.9
2,016,416	+	ftn2	Synpcc7942_1943	0.14	-0.6
2,016,424	-	ftn2	Synpcc7942_1943	0.15	-2.6
2,016,442	-	ftn2	Synpcc7942_1943	0.16	+0.1
2,016,455	+	ftn2	Synpcc7942_1943	0.16	-1.1
2,016,461	-	ftn2	Synpcc7942_1943	0.17	-1.3
2,016,462	+	ftn2	Synpcc7942_1943	0.17	-1.7
2,016,463	-	ftn2	Synpcc7942_1943	0.17	-2.4
2,016,463	-	ftn2	Synpcc7942_1943	0.17	-1.7
2,016,498	+	ftn2	Synpcc7942_1943	0.19	-1.7
2,016,498	+	ftn2	Synpcc7942_1943	0.19	+0.5
2,016,498	+	ftn2	Synpcc7942_1943	0.19	-3.7
2,016,506	-	ftn2	Synpcc7942_1943	0.19	-2.1
2,016,506	-	ftn2	Synpcc7942_1943	0.19	-2.7
2,016,556	-	ftn2	Synpcc7942_1943	0.22	-0.1
2,016,558	+	ftn2	Synpcc7942_1943	0.22	-1.7
2,016,560	-	ftn2	Synpcc7942_1943	0.22	-2.7
2,016,566	-	ftn2	Synpcc7942_1943	0.22	-1.1
2,016,569	+	ftn2	Synpcc7942_1943	0.22	-2.4
2,016,577	-	ftn2	Synpcc7942_1943	0.23	-2.9
2,016,624	+	ftn2	Synpcc7942_1943	0.25	-1.0
2,016,632	-	ftn2	Synpcc7942_1943	0.26	-1.7
2,016,680	-	ftn2	Synpcc7942_1943	0.28	-2.3
2,016,683	+	ftn2	Synpcc7942_1943	0.28	-2.7
2,016,689	+	ftn2	Synpcc7942_1943	0.29	-2.4
2,016,780	+	ftn2	Synpcc7942_1943	0.34	-2.4
2,016,814	+	ftn2	Synpcc7942_1943	0.35	-3.3
2,016,822	-	ftn2	Synpcc7942_1943	0.36	-1.1
2,016,865	+	ftn2	Synpcc7942_1943	0.38	-1.7
2,016,875	+	ftn2	Synpcc7942_1943	0.39	-2.1
2,016,883	-	ftn2	Synpcc7942_1943	0.39	-3.3
2,016,883	-	ftn2	Synpcc7942_1943	0.39	-2.7
2,016,883	-	ftn2	Synpcc7942_1943	0.39	-2.1
2,016,897	+	ftn2	Synpcc7942_1943	0.40	-2.4
2,017,012	+	ftn2	Synpcc7942_1943	0.46	-1.8
2,017,048	-	ftn2	Synpcc7942_1943	0.48	-2.4
2,017,103	+	ftn2	Synpcc7942_1943	0.51	-1.7
2,017,121	+	ftn2	Synpcc7942_1943	0.52	-2.1
2,017,189	-	ftn2	Synpcc7942_1943	0.55	-2.4
2,017,247	+	ftn2	Synpcc7942_1943	0.58	-2.7
2,017,299	-	ftn2	Synpcc7942_1943	0.61	-2.9
2,017,345	+	ftn2	Synpcc7942_1943	0.63	-3.6
2,017,345	+	ftn2	Synpcc7942_1943	0.63	-3.7
2,017,440	+	ftn2	Synpcc7942_1943	0.68	-1.1
2,017,440	+	ftn2	Synpcc7942_1943	0.68	-4.0
2,017,440	+	ftn2	Synpcc7942_1943	0.68	-2.1
2,017,476	+	ftn2	Synpcc7942_1943	0.70	-1.7
2,017,476	+	ftn2	Synpcc7942_1943	0.70	-1.1
2,017,487	+	ftn2	Synpcc7942_1943	0.71	-0.3
2,017,506	+	ftn2	Synpcc7942_1943	0.72	-4.9
2,017,516	+	ftn2	Synpcc7942_1943	0.72	-3.1
2,017,524	-	ftn2	Synpcc7942_1943	0.73	-3.3
2,017,524	-	ftn2	Synpcc7942_1943	0.73	-0.8
2,017,583	+	ftn2	Synpcc7942_1943	0.76	-1.7
2,017,655	-	ftn2	Synpcc7942_1943	0.80	-2.1
2,017,655	-	ftn2	Synpcc7942_1943	0.80	-2.4
2,017,670	+	ftn2	Synpcc7942_1943	0.81	-1.1
2,017,698	+	ftn2	Synpcc7942_1943	0.82	-0.1
2,017,734	+	ftn2	Synpcc7942_1943	0.84	-2.1
2,017,772	-	ftn2	Synpcc7942_1943	0.86	-0.1
2,017,804	-	ftn2	Synpcc7942_1943	0.88	-1.7
2,018,018	-				-3.1
2,018,029	+				-1.7
2,018,042	+				-1.7
2,018,052	+				+0.2
2,018,073	-				-1.1
2,018,103	-				+1.3
2,018,210	+				+0.6
2,018,212	-				+1.5
2,018,273	+				-1.9
2,018,277	-				-0.6
2,018,281	+				+0.1
2,018,297	-				-1.8
2,018,323	-				+3.6
2,018,323	-				+0.7