Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1903
Experiment: D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,976,080 | - | Synpcc7942_1902 | 0.14 | -0.4 | |
1,976,664 | - | Synpcc7942_1902 | 0.70 | -1.6 | |
1,976,675 | + | Synpcc7942_1902 | 0.71 | -0.3 | |
1,977,071 | - | -1.6 | |||
1,977,517 | + | Synpcc7942_1903 | 0.47 | -1.3 | |
1,977,718 | - | Synpcc7942_1903 | 0.65 | -1.0 | |
1,977,835 | - | Synpcc7942_1903 | 0.75 | -4.0 | |
1,978,134 | + | +0.8 | |||
1,978,366 | - | hlyD | Synpcc7942_1904 | 0.18 | +0.7 |
1,978,550 | - | hlyD | Synpcc7942_1904 | 0.32 | +0.3 |
1,978,572 | - | hlyD | Synpcc7942_1904 | 0.33 | +1.0 |
1,978,661 | - | hlyD | Synpcc7942_1904 | 0.40 | +0.4 |
1,978,738 | + | hlyD | Synpcc7942_1904 | 0.46 | -0.1 |
1,978,747 | - | hlyD | Synpcc7942_1904 | 0.47 | +0.2 |
1,978,792 | - | hlyD | Synpcc7942_1904 | 0.50 | +0.9 |
1,978,807 | + | hlyD | Synpcc7942_1904 | 0.51 | +0.3 |
1,978,832 | + | hlyD | Synpcc7942_1904 | 0.53 | -0.5 |
1,978,842 | - | hlyD | Synpcc7942_1904 | 0.54 | -0.1 |
1,978,938 | + | hlyD | Synpcc7942_1904 | 0.61 | +0.9 |
1,979,010 | - | hlyD | Synpcc7942_1904 | 0.66 | +2.7 |
1,979,096 | + | hlyD | Synpcc7942_1904 | 0.73 | -1.1 |
Or see this region's nucleotide sequence