Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1319

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
1,347,852	+				-0.4
1,347,852	+				+2.1
1,347,852	+				+0.2
1,347,852	+				+0.4
1,347,852	+				+0.1
1,347,860	-				+2.6
1,347,860	-				-1.7
1,347,860	-				+1.8
1,347,876	-				+0.3
1,347,882	-				+0.2
1,347,926	-				-1.1
1,347,949	-				-2.4
1,347,974	-				-0.1
1,348,055	+	mntB	Synpcc7942_1318	0.16	-0.7
1,348,070	-	mntB	Synpcc7942_1318	0.18	-3.3
1,348,112	-	mntB	Synpcc7942_1318	0.23	-1.9
1,348,118	-	mntB	Synpcc7942_1318	0.24	-2.9
1,348,154	-	mntB	Synpcc7942_1318	0.28	-2.7
1,348,177	+	mntB	Synpcc7942_1318	0.31	-2.5
1,348,188	+	mntB	Synpcc7942_1318	0.32	-1.1
1,348,251	-	mntB	Synpcc7942_1318	0.39	+1.9
1,348,340	-	mntB	Synpcc7942_1318	0.50	-1.3
1,348,352	-	mntB	Synpcc7942_1318	0.51	-2.4
1,348,368	-	mntB	Synpcc7942_1318	0.53	+0.6
1,348,390	+	mntB	Synpcc7942_1318	0.56	+0.2
1,348,398	-	mntB	Synpcc7942_1318	0.56	-0.1
1,348,413	+	mntB	Synpcc7942_1318	0.58	-1.1
1,348,433	+	mntB	Synpcc7942_1318	0.61	-1.2
1,348,448	+	mntB	Synpcc7942_1318	0.62	-3.1
1,348,471	-	mntB	Synpcc7942_1318	0.65	-0.4
1,348,518	+	mntB	Synpcc7942_1318	0.71	-1.5
1,348,548	-	mntB	Synpcc7942_1318	0.74	+0.5
1,348,549	+	mntB	Synpcc7942_1318	0.74	-2.0
1,348,554	+	mntB	Synpcc7942_1318	0.75	-1.1
1,348,554	+	mntB	Synpcc7942_1318	0.75	-2.7
1,348,568	+	mntB	Synpcc7942_1318	0.76	-0.7
1,348,573	+	mntB	Synpcc7942_1318	0.77	+1.5
1,348,581	-	mntB	Synpcc7942_1318	0.78	+0.3
1,348,586	+	mntB	Synpcc7942_1318	0.79	-0.2
1,348,601	-	mntB	Synpcc7942_1318	0.80	-1.4
1,348,617	-	mntB	Synpcc7942_1318	0.82	-2.4
1,348,620	+	mntB	Synpcc7942_1318	0.83	-1.1
1,348,644	+	mntB	Synpcc7942_1318	0.85	+0.5
1,348,652	-	mntB	Synpcc7942_1318	0.86	-1.1
1,348,673	+	mntB	Synpcc7942_1318	0.89	-0.9
1,348,678	+	mntB	Synpcc7942_1318	0.89	-0.8
1,348,738	-				+0.4
1,348,741	+				-0.3
1,348,764	+				+0.8
1,348,780	-				+0.9
1,348,794	+				+1.5
1,348,796	-				+0.4
1,348,840	-				+0.6
1,348,890	-		Synpcc7942_1319	0.10	+0.4
1,348,972	-		Synpcc7942_1319	0.26	-0.4
1,348,982	-		Synpcc7942_1319	0.27	+0.5
1,348,987	+		Synpcc7942_1319	0.28	-0.4
1,349,002	-		Synpcc7942_1319	0.31	+1.8
1,349,004	+		Synpcc7942_1319	0.31	+0.9
1,349,012	-		Synpcc7942_1319	0.33	+0.7
1,349,041	-		Synpcc7942_1319	0.38	-2.4
1,349,041	-		Synpcc7942_1319	0.38	+0.7
1,349,070	+		Synpcc7942_1319	0.44	-0.1
1,349,104	+				-1.1
1,349,104	+		Synpcc7942_1319	0.50	-0.7
1,349,104	+		Synpcc7942_1319	0.50	+1.5
1,349,104	+		Synpcc7942_1319	0.50	-0.4
1,349,104	+		Synpcc7942_1319	0.50	+0.7
1,349,104	+		Synpcc7942_1319	0.50	-2.7
1,349,104	+		Synpcc7942_1319	0.50	+1.5
1,349,112	-		Synpcc7942_1319	0.51	-0.2
1,349,112	-		Synpcc7942_1319	0.51	+2.5
1,349,112	-		Synpcc7942_1319	0.51	+0.9
1,349,112	-		Synpcc7942_1319	0.51	-0.7
1,349,112	-		Synpcc7942_1319	0.51	+1.8
1,349,112	-		Synpcc7942_1319	0.51	-0.5
1,349,112	-		Synpcc7942_1319	0.51	+0.7
1,349,112	-		Synpcc7942_1319	0.51	-0.9
1,349,112	-		Synpcc7942_1319	0.51	+2.0
1,349,118	+		Synpcc7942_1319	0.53	-2.1
1,349,130	+		Synpcc7942_1319	0.55	+0.1
1,349,131	+		Synpcc7942_1319	0.55	+1.6
1,349,134	-		Synpcc7942_1319	0.56	+1.0
1,349,144	-		Synpcc7942_1319	0.57	+1.0
1,349,148	+		Synpcc7942_1319	0.58	+0.2
1,349,149	+		Synpcc7942_1319	0.58	+1.8
1,349,184	-		Synpcc7942_1319	0.65	+0.7
1,349,186	+		Synpcc7942_1319	0.65	+0.9
1,349,222	+		Synpcc7942_1319	0.72	+1.1
1,349,254	+		Synpcc7942_1319	0.78	+1.4
1,349,259	+		Synpcc7942_1319	0.79	+0.5
1,349,282	+		Synpcc7942_1319	0.83	+0.6
1,349,293	+		Synpcc7942_1319	0.85	-1.1
1,349,318	-		Synpcc7942_1319	0.90	+0.0
1,349,326	-				-2.7
1,349,347	-				-0.7
1,349,348	+				+1.6
1,349,348	+				+0.4
1,349,353	+				+0.8
1,349,356	-				+1.2
1,349,358	+				+0.9
1,349,358	+				+0.5
1,349,366	-				-2.1
1,349,394	+				-0.8
1,349,401	+				+1.2
1,349,402	-				+0.6
1,349,402	-				+1.2
1,349,402	-				+0.7
1,349,402	-				+1.6
1,349,409	-				-0.4
1,349,414	+				+1.3
1,349,417	-				+0.5
1,349,437	+		Synpcc7942_1320	0.10	+2.4
1,349,447	+		Synpcc7942_1320	0.11	-0.7
1,349,468	+		Synpcc7942_1320	0.13	+0.3
1,349,498	-		Synpcc7942_1320	0.17	+0.7
1,349,549	-		Synpcc7942_1320	0.22	+0.3
1,349,557	-		Synpcc7942_1320	0.23	+0.8
1,349,596	+		Synpcc7942_1320	0.27	+0.3
1,349,596	+		Synpcc7942_1320	0.27	-0.4
1,349,604	-		Synpcc7942_1320	0.28	+0.3
1,349,604	-		Synpcc7942_1320	0.28	+2.3
1,349,604	-		Synpcc7942_1320	0.28	+0.3
1,349,604	-		Synpcc7942_1320	0.28	+0.2
1,349,604	-		Synpcc7942_1320	0.28	-1.2
1,349,625	+		Synpcc7942_1320	0.30	-1.7
1,349,651	+		Synpcc7942_1320	0.32	-1.7
1,349,659	-		Synpcc7942_1320	0.33	+1.5
1,349,660	-		Synpcc7942_1320	0.33	-0.1
1,349,660	-		Synpcc7942_1320	0.33	+0.7
1,349,673	+		Synpcc7942_1320	0.35	+0.2
1,349,680	+		Synpcc7942_1320	0.36	+0.4
1,349,686	-		Synpcc7942_1320	0.36	+0.7
1,349,688	-		Synpcc7942_1320	0.36	-2.4
1,349,688	-		Synpcc7942_1320	0.36	-2.2
1,349,688	-		Synpcc7942_1320	0.36	+2.5
1,349,724	+		Synpcc7942_1320	0.40	-1.1
1,349,735	-		Synpcc7942_1320	0.41	+0.4
1,349,738	-		Synpcc7942_1320	0.42	+0.8
1,349,772	-		Synpcc7942_1320	0.45	-2.3
1,349,773	-		Synpcc7942_1320	0.45	-0.6
1,349,775	+		Synpcc7942_1320	0.45	+0.5
1,349,776	+		Synpcc7942_1320	0.46	+1.6
1,349,789	+		Synpcc7942_1320	0.47	+0.8
1,349,789	+		Synpcc7942_1320	0.47	+0.6
1,349,789	+		Synpcc7942_1320	0.47	-0.1
1,349,797	-		Synpcc7942_1320	0.48	+0.5
1,349,797	-		Synpcc7942_1320	0.48	+1.9
1,349,800	+		Synpcc7942_1320	0.48	+0.4
1,349,800	+		Synpcc7942_1320	0.48	+0.9
1,349,825	+		Synpcc7942_1320	0.51	+0.1
1,349,844	+		Synpcc7942_1320	0.53	-1.0
1,349,867	+		Synpcc7942_1320	0.55	+0.7
1,349,915	+		Synpcc7942_1320	0.60	+0.3
1,349,925	+		Synpcc7942_1320	0.61	+1.0
1,349,960	+		Synpcc7942_1320	0.65	+0.2
1,349,963	+		Synpcc7942_1320	0.65	-2.9
1,349,985	+		Synpcc7942_1320	0.67	-0.5
1,350,015	+		Synpcc7942_1320	0.71	+2.6
1,350,024	-		Synpcc7942_1320	0.71	+0.9
1,350,067	-		Synpcc7942_1320	0.76	+0.5
1,350,092	-		Synpcc7942_1320	0.79	-0.8
1,350,107	+		Synpcc7942_1320	0.80	-1.1
1,350,107	+		Synpcc7942_1320	0.80	+0.8
1,350,172	-		Synpcc7942_1320	0.87	-1.1
1,350,178	+		Synpcc7942_1320	0.88	+1.4
1,350,179	-		Synpcc7942_1320	0.88	+2.4
1,350,197	-		Synpcc7942_1320	0.90	-1.7
1,350,202	-				-0.8
1,350,261	-				+1.0
1,350,278	+				+2.3
1,350,295	-				-2.9
1,350,295	-				-2.7
1,350,336	+				-1.9
1,350,341	+				+0.4
1,350,349	-				-1.1
1,350,356	+				+1.0
1,350,356	+				-2.1
1,350,356	+				+2.2
1,350,356	+				-1.2
1,350,356	+				+0.4
1,350,356	+				-1.7
1,350,364	-				-3.4
1,350,364	-				+0.5