Experiment: D-Glucose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05900 and H281DRAFT_05901 are separated by 29 nucleotides H281DRAFT_05901 and H281DRAFT_05902 are separated by 151 nucleotides H281DRAFT_05902 and H281DRAFT_05903 are separated by 129 nucleotides H281DRAFT_05903 and H281DRAFT_05904 are separated by 265 nucleotides
H281DRAFT_05900: H281DRAFT_05900 - HD-GYP domain, at 36,414 to 37,904
_05900
H281DRAFT_05901: H281DRAFT_05901 - Cupin domain-containing protein, at 37,934 to 38,275
_05901
H281DRAFT_05902: H281DRAFT_05902 - 2-Methylisocitrate lyase, PEP mutase family, at 38,427 to 39,275
_05902
H281DRAFT_05903: H281DRAFT_05903 - osmotically inducible protein OsmC, at 39,405 to 39,830
_05903
H281DRAFT_05904: H281DRAFT_05904 - transcriptional regulator, RpiR family, at 40,096 to 40,950
_05904
Position (kb) 38
39
40 Strain fitness (log2 ratio) -1
0
1
2 at 37.522 kb on + strand, within H281DRAFT_05900 at 37.523 kb on - strand, within H281DRAFT_05900 at 37.523 kb on - strand, within H281DRAFT_05900 at 37.993 kb on - strand, within H281DRAFT_05901 at 37.993 kb on - strand at 38.123 kb on + strand, within H281DRAFT_05901 at 38.123 kb on + strand, within H281DRAFT_05901 at 38.530 kb on - strand, within H281DRAFT_05902 at 39.736 kb on + strand at 39.737 kb on - strand, within H281DRAFT_05903
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C) remove 37,522 + H281DRAFT_05900 0.74 -0.8 37,523 - H281DRAFT_05900 0.74 +0.9 37,523 - H281DRAFT_05900 0.74 +0.7 37,993 - H281DRAFT_05901 0.17 +0.1 37,993 - +2.2 38,123 + H281DRAFT_05901 0.55 +1.5 38,123 + H281DRAFT_05901 0.55 -0.1 38,530 - H281DRAFT_05902 0.12 -0.6 39,736 + -0.9 39,737 - H281DRAFT_05903 0.78 -0.0
Or see this region's nucleotide sequence