Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05700

Experiment: D-Glucose 20 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntH281DRAFT_05699 and H281DRAFT_05700 are separated by 277 nucleotidesH281DRAFT_05700 and H281DRAFT_05701 are separated by 33 nucleotides H281DRAFT_05699: H281DRAFT_05699 - sulfate-transporting ATPase, at 116,086 to 117,753 _05699 H281DRAFT_05700: H281DRAFT_05700 - Protein of unknown function (DUF3761), at 118,031 to 118,330 _05700 H281DRAFT_05701: H281DRAFT_05701 - glycerol 3-phosphate ABC transporter ATP-binding protein, at 118,364 to 119,452 _05701 Position (kb) 118 119Strain fitness (log2 ratio) -2 -1 0 1 2at 117.043 kb on - strand, within H281DRAFT_05699at 117.096 kb on - strand, within H281DRAFT_05699at 117.096 kb on - strand, within H281DRAFT_05699at 117.371 kb on + strand, within H281DRAFT_05699at 117.371 kb on + strand, within H281DRAFT_05699at 117.371 kb on + strand, within H281DRAFT_05699at 117.371 kb on + strand, within H281DRAFT_05699at 117.372 kb on - strand, within H281DRAFT_05699at 117.372 kb on - strand, within H281DRAFT_05699at 117.372 kb on - strand, within H281DRAFT_05699at 117.537 kb on - strand, within H281DRAFT_05699at 117.743 kb on + strandat 117.743 kb on + strandat 117.744 kb on - strandat 117.744 kb on - strandat 117.744 kb on - strandat 117.814 kb on + strandat 117.835 kb on - strandat 117.955 kb on - strandat 118.032 kb on + strandat 118.033 kb on - strandat 118.033 kb on - strandat 118.095 kb on + strand, within H281DRAFT_05700at 118.096 kb on - strand, within H281DRAFT_05700at 118.192 kb on - strand, within H281DRAFT_05700at 118.246 kb on - strand, within H281DRAFT_05700at 118.555 kb on + strand, within H281DRAFT_05701at 118.555 kb on + strand, within H281DRAFT_05701at 118.556 kb on - strand, within H281DRAFT_05701at 119.158 kb on - strand, within H281DRAFT_05701at 119.182 kb on + strand, within H281DRAFT_05701at 119.191 kb on - strand, within H281DRAFT_05701at 119.200 kb on - strand, within H281DRAFT_05701at 119.200 kb on - strand, within H281DRAFT_05701

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C)
remove
117,043 - H281DRAFT_05699 0.57 -0.2
117,096 - H281DRAFT_05699 0.61 -1.7
117,096 - H281DRAFT_05699 0.61 +0.7
117,371 + H281DRAFT_05699 0.77 +0.5
117,371 + H281DRAFT_05699 0.77 -2.2
117,371 + H281DRAFT_05699 0.77 +1.9
117,371 + H281DRAFT_05699 0.77 -1.2
117,372 - H281DRAFT_05699 0.77 -0.1
117,372 - H281DRAFT_05699 0.77 -1.3
117,372 - H281DRAFT_05699 0.77 -1.9
117,537 - H281DRAFT_05699 0.87 +0.1
117,743 + +0.6
117,743 + +0.4
117,744 - +1.6
117,744 - +1.5
117,744 - +0.9
117,814 + -1.8
117,835 - +0.4
117,955 - +1.3
118,032 + -0.4
118,033 - +0.5
118,033 - +0.9
118,095 + H281DRAFT_05700 0.21 +0.9
118,096 - H281DRAFT_05700 0.22 +0.5
118,192 - H281DRAFT_05700 0.54 +0.1
118,246 - H281DRAFT_05700 0.72 +0.9
118,555 + H281DRAFT_05701 0.18 +0.4
118,555 + H281DRAFT_05701 0.18 -0.8
118,556 - H281DRAFT_05701 0.18 +0.1
119,158 - H281DRAFT_05701 0.73 +0.6
119,182 + H281DRAFT_05701 0.75 +0.4
119,191 - H281DRAFT_05701 0.76 -0.3
119,200 - H281DRAFT_05701 0.77 +0.2
119,200 - H281DRAFT_05701 0.77 -0.4

Or see this region's nucleotide sequence