Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03142

Experiment: D-Glucose 20 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03141 and H281DRAFT_03142 are separated by 266 nucleotidesH281DRAFT_03142 and H281DRAFT_03143 are separated by 199 nucleotides H281DRAFT_03141: H281DRAFT_03141 - sulfate permease, SulP family, at 178,474 to 179,961 _03141 H281DRAFT_03142: H281DRAFT_03142 - Lipid-binding SYLF domain-containing protein, at 180,228 to 180,818 _03142 H281DRAFT_03143: H281DRAFT_03143 - FAD/FMN-containing dehydrogenase, at 181,018 to 182,406 _03143 Position (kb) 180 181Strain fitness (log2 ratio) -2 -1 0 1at 179.249 kb on + strand, within H281DRAFT_03141at 179.249 kb on + strand, within H281DRAFT_03141at 179.352 kb on + strand, within H281DRAFT_03141at 179.442 kb on - strand, within H281DRAFT_03141at 179.668 kb on + strand, within H281DRAFT_03141at 179.688 kb on - strand, within H281DRAFT_03141at 179.944 kb on - strandat 179.956 kb on - strandat 180.404 kb on + strand, within H281DRAFT_03142at 180.505 kb on + strand, within H281DRAFT_03142at 180.505 kb on + strand, within H281DRAFT_03142at 180.505 kb on + strand, within H281DRAFT_03142at 180.506 kb on - strandat 180.506 kb on - strand, within H281DRAFT_03142at 180.649 kb on + strandat 180.821 kb on + strandat 180.822 kb on - strandat 180.822 kb on - strandat 180.833 kb on + strandat 180.833 kb on + strandat 180.833 kb on + strandat 180.833 kb on + strandat 181.055 kb on - strandat 181.101 kb on - strandat 181.112 kb on + strandat 181.113 kb on - strandat 181.160 kb on + strand, within H281DRAFT_03143at 181.160 kb on + strand, within H281DRAFT_03143at 181.160 kb on + strand, within H281DRAFT_03143at 181.161 kb on - strand, within H281DRAFT_03143at 181.587 kb on - strand, within H281DRAFT_03143at 181.587 kb on - strand, within H281DRAFT_03143

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C)
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179,249 + H281DRAFT_03141 0.52 +0.5
179,249 + H281DRAFT_03141 0.52 +0.1
179,352 + H281DRAFT_03141 0.59 -0.6
179,442 - H281DRAFT_03141 0.65 +1.4
179,668 + H281DRAFT_03141 0.80 -0.1
179,688 - H281DRAFT_03141 0.82 +0.3
179,944 - -0.0
179,956 - -1.9
180,404 + H281DRAFT_03142 0.30 +1.3
180,505 + H281DRAFT_03142 0.47 +0.8
180,505 + H281DRAFT_03142 0.47 +0.9
180,505 + H281DRAFT_03142 0.47 +0.6
180,506 - +1.2
180,506 - H281DRAFT_03142 0.47 -1.3
180,649 + +0.8
180,821 + +0.3
180,822 - -2.1
180,822 - +1.0
180,833 + -0.6
180,833 + -0.4
180,833 + +0.3
180,833 + -0.1
181,055 - +0.2
181,101 - -0.3
181,112 + +1.5
181,113 - -0.3
181,160 + H281DRAFT_03143 0.10 +0.5
181,160 + H281DRAFT_03143 0.10 -0.0
181,160 + H281DRAFT_03143 0.10 +0.1
181,161 - H281DRAFT_03143 0.10 +0.6
181,587 - H281DRAFT_03143 0.41 +0.2
181,587 - H281DRAFT_03143 0.41 +0.2

Or see this region's nucleotide sequence