Experiment: D-Glucose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02530 and H281DRAFT_02531 are separated by 56 nucleotides H281DRAFT_02531 and H281DRAFT_02532 are separated by 14 nucleotides H281DRAFT_02532 and H281DRAFT_02533 are separated by 12 nucleotides H281DRAFT_02533 and H281DRAFT_02534 are separated by 51 nucleotides
H281DRAFT_02530: H281DRAFT_02530 - transcriptional regulator, IclR family, at 106,073 to 106,864
_02530
H281DRAFT_02531: H281DRAFT_02531 - Acyl dehydratase, at 106,921 to 107,406
_02531
H281DRAFT_02532: H281DRAFT_02532 - Sugar phosphate isomerase/epimerase, at 107,421 to 108,284
_02532
H281DRAFT_02533: H281DRAFT_02533 - Acyl dehydratase, at 108,297 to 108,758
_02533
H281DRAFT_02534: H281DRAFT_02534 - propionate CoA-transferase, at 108,810 to 110,426
_02534
Position (kb)
107
108
109 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 106.428 kb on + strand, within H281DRAFT_02530 at 106.429 kb on - strand, within H281DRAFT_02530 at 107.005 kb on + strand, within H281DRAFT_02531 at 107.830 kb on + strand, within H281DRAFT_02532 at 107.890 kb on - strand, within H281DRAFT_02532 at 107.890 kb on - strand, within H281DRAFT_02532 at 107.995 kb on - strand, within H281DRAFT_02532 at 108.282 kb on + strand at 108.339 kb on + strand at 108.340 kb on - strand at 108.341 kb on + strand at 108.341 kb on + strand at 108.489 kb on + strand, within H281DRAFT_02533 at 108.490 kb on - strand, within H281DRAFT_02533 at 108.490 kb on - strand, within H281DRAFT_02533 at 108.492 kb on - strand, within H281DRAFT_02533 at 108.492 kb on - strand, within H281DRAFT_02533 at 108.492 kb on - strand, within H281DRAFT_02533 at 108.783 kb on + strand at 108.822 kb on - strand at 108.822 kb on - strand at 109.036 kb on + strand, within H281DRAFT_02534 at 109.037 kb on - strand, within H281DRAFT_02534
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C) remove 106,428 + H281DRAFT_02530 0.45 +0.1 106,429 - H281DRAFT_02530 0.45 -0.3 107,005 + H281DRAFT_02531 0.17 -0.0 107,830 + H281DRAFT_02532 0.47 +1.3 107,890 - H281DRAFT_02532 0.54 -2.8 107,890 - H281DRAFT_02532 0.54 +1.8 107,995 - H281DRAFT_02532 0.66 +1.1 108,282 + +0.2 108,339 + -0.4 108,340 - -0.1 108,341 + -0.3 108,341 + +0.7 108,489 + H281DRAFT_02533 0.42 -0.3 108,490 - H281DRAFT_02533 0.42 -0.5 108,490 - H281DRAFT_02533 0.42 +0.2 108,492 - H281DRAFT_02533 0.42 -0.3 108,492 - H281DRAFT_02533 0.42 -1.4 108,492 - H281DRAFT_02533 0.42 -0.4 108,783 + -0.5 108,822 - +0.0 108,822 - +0.2 109,036 + H281DRAFT_02534 0.14 +0.9 109,037 - H281DRAFT_02534 0.14 +0.8
Or see this region's nucleotide sequence