Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01805

Experiment: D-Glucose 20 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01804 and H281DRAFT_01805 are separated by 122 nucleotidesH281DRAFT_01805 and H281DRAFT_01806 are separated by 224 nucleotides H281DRAFT_01804: H281DRAFT_01804 - Predicted arabinose efflux permease, MFS family, at 704,505 to 705,749 _01804 H281DRAFT_01805: H281DRAFT_01805 - cardiolipin synthase, at 705,872 to 707,227 _01805 H281DRAFT_01806: H281DRAFT_01806 - Nucleoside-diphosphate-sugar epimerase, at 707,452 to 708,519 _01806 Position (kb) 705 706 707 708Strain fitness (log2 ratio) -3 -2 -1 0 1at 704.922 kb on + strand, within H281DRAFT_01804at 704.922 kb on + strand, within H281DRAFT_01804at 704.923 kb on - strand, within H281DRAFT_01804at 705.440 kb on + strand, within H281DRAFT_01804at 705.582 kb on + strand, within H281DRAFT_01804at 705.582 kb on + strand, within H281DRAFT_01804at 705.630 kb on - strandat 705.638 kb on - strandat 705.638 kb on - strandat 705.748 kb on - strandat 705.751 kb on + strandat 705.751 kb on + strandat 705.918 kb on + strandat 706.158 kb on + strand, within H281DRAFT_01805at 706.159 kb on - strand, within H281DRAFT_01805at 706.197 kb on + strand, within H281DRAFT_01805at 706.238 kb on + strand, within H281DRAFT_01805at 706.691 kb on - strand, within H281DRAFT_01805at 706.739 kb on + strand, within H281DRAFT_01805at 706.740 kb on - strand, within H281DRAFT_01805at 706.791 kb on - strand, within H281DRAFT_01805at 706.973 kb on + strand, within H281DRAFT_01805at 706.973 kb on + strand, within H281DRAFT_01805at 706.973 kb on + strand, within H281DRAFT_01805at 706.974 kb on - strand, within H281DRAFT_01805at 706.974 kb on - strand, within H281DRAFT_01805at 707.004 kb on - strand, within H281DRAFT_01805at 707.079 kb on - strand, within H281DRAFT_01805at 707.079 kb on - strand, within H281DRAFT_01805at 707.146 kb on + strandat 707.146 kb on + strandat 707.147 kb on - strandat 707.443 kb on - strandat 707.794 kb on + strand, within H281DRAFT_01806at 707.887 kb on + strand, within H281DRAFT_01806at 707.926 kb on + strand, within H281DRAFT_01806at 707.927 kb on - strand, within H281DRAFT_01806

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C)
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704,922 + H281DRAFT_01804 0.33 +0.0
704,922 + H281DRAFT_01804 0.33 -1.3
704,923 - H281DRAFT_01804 0.34 -0.6
705,440 + H281DRAFT_01804 0.75 -0.9
705,582 + H281DRAFT_01804 0.87 +0.0
705,582 + H281DRAFT_01804 0.87 -0.2
705,630 - -2.0
705,638 - -0.2
705,638 - +1.4
705,748 - -0.5
705,751 + -0.3
705,751 + +0.0
705,918 + +0.0
706,158 + H281DRAFT_01805 0.21 +0.7
706,159 - H281DRAFT_01805 0.21 +1.1
706,197 + H281DRAFT_01805 0.24 -0.2
706,238 + H281DRAFT_01805 0.27 +0.0
706,691 - H281DRAFT_01805 0.60 -1.2
706,739 + H281DRAFT_01805 0.64 +0.5
706,740 - H281DRAFT_01805 0.64 -0.5
706,791 - H281DRAFT_01805 0.68 +0.5
706,973 + H281DRAFT_01805 0.81 -0.2
706,973 + H281DRAFT_01805 0.81 +0.4
706,973 + H281DRAFT_01805 0.81 -0.6
706,974 - H281DRAFT_01805 0.81 +0.3
706,974 - H281DRAFT_01805 0.81 -1.6
707,004 - H281DRAFT_01805 0.83 +0.7
707,079 - H281DRAFT_01805 0.89 +0.3
707,079 - H281DRAFT_01805 0.89 -0.1
707,146 + +0.2
707,146 + -0.6
707,147 - -0.9
707,443 - +0.3
707,794 + H281DRAFT_01806 0.32 +0.9
707,887 + H281DRAFT_01806 0.41 +0.1
707,926 + H281DRAFT_01806 0.44 -2.9
707,927 - H281DRAFT_01806 0.44 +0.1

Or see this region's nucleotide sequence