Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01024

Experiment: D-Glucose 20 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01023 and H281DRAFT_01024 are separated by 298 nucleotidesH281DRAFT_01024 and H281DRAFT_01025 are separated by 39 nucleotides H281DRAFT_01023: H281DRAFT_01023 - filamentous hemagglutinin family N-terminal domain-containing protein, at 1,147,698 to 1,149,947 _01023 H281DRAFT_01024: H281DRAFT_01024 - hypothetical protein, at 1,150,246 to 1,150,554 _01024 H281DRAFT_01025: H281DRAFT_01025 - transcriptional regulator, MarR family, at 1,150,594 to 1,151,043 _01025 Position (kb) 1150 1151Strain fitness (log2 ratio) -1 0 1 2 3at 1149.322 kb on - strandat 1150.037 kb on + strandat 1150.037 kb on + strandat 1150.154 kb on - strandat 1150.306 kb on + strand, within H281DRAFT_01024at 1150.307 kb on - strand, within H281DRAFT_01024at 1150.990 kb on + strand, within H281DRAFT_01025at 1151.135 kb on - strandat 1151.187 kb on - strandat 1151.263 kb on - strandat 1151.394 kb on + strandat 1151.395 kb on - strandat 1151.465 kb on + strandat 1151.465 kb on + strandat 1151.465 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C)
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1,149,322 - +3.4
1,150,037 + -0.1
1,150,037 + +0.3
1,150,154 - -1.0
1,150,306 + H281DRAFT_01024 0.19 +0.6
1,150,307 - H281DRAFT_01024 0.20 +0.6
1,150,990 + H281DRAFT_01025 0.88 +0.4
1,151,135 - -1.4
1,151,187 - -0.2
1,151,263 - +0.2
1,151,394 + +0.0
1,151,395 - +0.5
1,151,465 + +1.6
1,151,465 + +0.6
1,151,465 + +0.7

Or see this region's nucleotide sequence