Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3253 and Dsui_3254 are separated by 146 nucleotides Dsui_3254 and Dsui_3255 are separated by 171 nucleotides Dsui_3255 and Dsui_3256 are separated by 35 nucleotides Dsui_3256 and Dsui_3257 overlap by 11 nucleotides
Dsui_3253: Dsui_3253 - Protein of unknown function (DUF3579), at 3,493,488 to 3,493,781
_3253
Dsui_3254: Dsui_3254 - ribosomal protein S20, at 3,493,928 to 3,494,194
_3254
Dsui_3255: Dsui_3255 - integral membrane protein MviN, at 3,494,366 to 3,495,910
_3255
Dsui_3256: Dsui_3256 - Raf kinase inhibitor-like protein, YbhB/YbcL family, at 3,495,946 to 3,496,575
_3256
Dsui_3257: Dsui_3257 - bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities, at 3,496,565 to 3,497,710
_3257
Position (kb)
3494
3495
3496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3493.381 kb on + strand at 3493.433 kb on - strand at 3493.440 kb on + strand at 3493.443 kb on - strand at 3493.492 kb on - strand at 3493.596 kb on - strand, within Dsui_3253 at 3493.637 kb on + strand, within Dsui_3253 at 3493.691 kb on + strand, within Dsui_3253 at 3493.691 kb on + strand, within Dsui_3253 at 3493.712 kb on - strand, within Dsui_3253 at 3493.799 kb on + strand at 3493.838 kb on - strand at 3495.972 kb on - strand at 3496.018 kb on + strand, within Dsui_3256 at 3496.040 kb on + strand, within Dsui_3256 at 3496.060 kb on - strand at 3496.062 kb on + strand, within Dsui_3256 at 3496.102 kb on - strand, within Dsui_3256 at 3496.112 kb on - strand, within Dsui_3256 at 3496.197 kb on - strand, within Dsui_3256 at 3496.230 kb on - strand, within Dsui_3256 at 3496.270 kb on + strand, within Dsui_3256 at 3496.368 kb on + strand, within Dsui_3256 at 3496.577 kb on - strand at 3496.600 kb on - strand at 3496.603 kb on + strand at 3496.617 kb on - strand at 3496.714 kb on + strand, within Dsui_3257 at 3496.722 kb on - strand, within Dsui_3257 at 3496.724 kb on + strand, within Dsui_3257 at 3496.783 kb on - strand, within Dsui_3257 at 3496.812 kb on - strand, within Dsui_3257 at 3496.843 kb on - strand, within Dsui_3257
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 3,493,381 + +0.8 3,493,433 - -1.0 3,493,440 + +0.9 3,493,443 - -2.1 3,493,492 - -1.2 3,493,596 - Dsui_3253 0.37 -1.8 3,493,637 + Dsui_3253 0.51 -2.6 3,493,691 + Dsui_3253 0.69 -1.3 3,493,691 + Dsui_3253 0.69 +0.7 3,493,712 - Dsui_3253 0.76 -3.1 3,493,799 + +0.8 3,493,838 - +0.6 3,495,972 - +0.2 3,496,018 + Dsui_3256 0.11 +1.3 3,496,040 + Dsui_3256 0.15 +1.1 3,496,060 - -1.6 3,496,062 + Dsui_3256 0.18 +2.0 3,496,102 - Dsui_3256 0.25 -0.2 3,496,112 - Dsui_3256 0.26 -1.1 3,496,197 - Dsui_3256 0.40 +0.6 3,496,230 - Dsui_3256 0.45 -1.3 3,496,270 + Dsui_3256 0.51 +0.7 3,496,368 + Dsui_3256 0.67 +0.1 3,496,577 - +0.8 3,496,600 - +0.6 3,496,603 + +0.4 3,496,617 - +1.4 3,496,714 + Dsui_3257 0.13 +1.5 3,496,722 - Dsui_3257 0.14 +1.0 3,496,724 + Dsui_3257 0.14 -2.1 3,496,783 - Dsui_3257 0.19 +0.0 3,496,812 - Dsui_3257 0.22 +1.1 3,496,843 - Dsui_3257 0.24 +1.1
Or see this region's nucleotide sequence