Strain Fitness in Dechlorosoma suillum PS around Dsui_2783

Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2782 and Dsui_2783 are separated by 40 nucleotidesDsui_2783 and Dsui_2784 are separated by 871 nucleotides Dsui_2782: Dsui_2782 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 2,949,123 to 2,950,247 _2782 Dsui_2783: Dsui_2783 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 2,950,288 to 2,951,418 _2783 Dsui_2784: Dsui_2784 - hypothetical protein, at 2,952,290 to 2,952,892 _2784 Position (kb) 2950 2951 2952Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2949.342 kb on - strandat 2949.696 kb on + strand, within Dsui_2782at 2949.721 kb on + strand, within Dsui_2782at 2949.778 kb on - strand, within Dsui_2782at 2950.142 kb on - strandat 2950.214 kb on - strandat 2950.403 kb on + strandat 2950.480 kb on - strand, within Dsui_2783at 2950.501 kb on - strand, within Dsui_2783at 2950.676 kb on + strandat 2951.153 kb on - strandat 2951.153 kb on - strand, within Dsui_2783at 2951.156 kb on - strand, within Dsui_2783at 2951.201 kb on - strand, within Dsui_2783at 2951.280 kb on + strand, within Dsui_2783at 2951.392 kb on + strandat 2951.392 kb on + strandat 2951.392 kb on + strandat 2951.392 kb on + strandat 2951.400 kb on - strandat 2951.415 kb on + strandat 2951.457 kb on - strandat 2951.526 kb on - strandat 2951.584 kb on + strandat 2951.646 kb on - strandat 2951.721 kb on + strandat 2951.736 kb on + strandat 2951.744 kb on - strandat 2951.793 kb on - strandat 2951.916 kb on - strandat 2952.003 kb on - strandat 2952.107 kb on - strandat 2952.174 kb on - strandat 2952.188 kb on - strandat 2952.249 kb on - strandat 2952.277 kb on - strandat 2952.356 kb on - strand, within Dsui_2784at 2952.356 kb on - strand, within Dsui_2784at 2952.357 kb on - strand, within Dsui_2784at 2952.367 kb on - strand, within Dsui_2784at 2952.367 kb on - strand, within Dsui_2784at 2952.367 kb on - strandat 2952.383 kb on + strand, within Dsui_2784at 2952.389 kb on - strandat 2952.406 kb on + strand, within Dsui_2784at 2952.406 kb on + strand, within Dsui_2784at 2952.414 kb on - strand, within Dsui_2784

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Per-strain Table

Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate
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2,949,342 - -3.7
2,949,696 + Dsui_2782 0.51 -2.1
2,949,721 + Dsui_2782 0.53 +1.2
2,949,778 - Dsui_2782 0.58 -3.1
2,950,142 - -1.9
2,950,214 - -0.8
2,950,403 + -1.8
2,950,480 - Dsui_2783 0.17 -0.5
2,950,501 - Dsui_2783 0.19 -2.5
2,950,676 + -1.2
2,951,153 - -0.2
2,951,153 - Dsui_2783 0.76 -1.4
2,951,156 - Dsui_2783 0.77 -0.8
2,951,201 - Dsui_2783 0.81 -0.4
2,951,280 + Dsui_2783 0.88 -0.8
2,951,392 + +0.6
2,951,392 + +0.3
2,951,392 + +0.7
2,951,392 + +0.7
2,951,400 - -1.1
2,951,415 + +0.1
2,951,457 - -2.4
2,951,526 - +1.8
2,951,584 + +1.8
2,951,646 - -2.5
2,951,721 + -1.8
2,951,736 + -2.0
2,951,744 - -0.8
2,951,793 - +1.4
2,951,916 - +0.6
2,952,003 - -0.2
2,952,107 - +1.0
2,952,174 - +0.4
2,952,188 - +0.3
2,952,249 - +0.3
2,952,277 - -0.5
2,952,356 - Dsui_2784 0.11 +0.3
2,952,356 - Dsui_2784 0.11 +0.2
2,952,357 - Dsui_2784 0.11 +0.4
2,952,367 - Dsui_2784 0.13 -2.5
2,952,367 - Dsui_2784 0.13 -0.4
2,952,367 - -1.5
2,952,383 + Dsui_2784 0.15 +1.0
2,952,389 - -1.9
2,952,406 + Dsui_2784 0.19 +4.0
2,952,406 + Dsui_2784 0.19 -0.4
2,952,414 - Dsui_2784 0.21 -0.3

Or see this region's nucleotide sequence