Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2758 and Dsui_2759 are separated by 283 nucleotides Dsui_2759 and Dsui_2760 are separated by 349 nucleotides Dsui_2760 and Dsui_2761 are separated by 97 nucleotides
Dsui_2758: Dsui_2758 - putative SAM-dependent methyltransferase, at 2,917,617 to 2,918,633
_2758
Dsui_2759: Dsui_2759 - pseudouridine synthase family protein, at 2,918,917 to 2,920,515
_2759
Dsui_2760: Dsui_2760 - translation initiation factor IF-1, at 2,920,865 to 2,921,125
_2760
Dsui_2761: Dsui_2761 - hypothetical protein, at 2,921,223 to 2,921,387
_2761
Position (kb)
2918
2919
2920
2921 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2918.123 kb on + strand, within Dsui_2758 at 2918.238 kb on - strand, within Dsui_2758 at 2918.276 kb on + strand, within Dsui_2758 at 2918.276 kb on + strand, within Dsui_2758 at 2918.325 kb on - strand, within Dsui_2758 at 2918.627 kb on + strand at 2918.671 kb on + strand at 2918.671 kb on + strand at 2918.671 kb on + strand at 2918.706 kb on - strand at 2918.877 kb on + strand at 2918.885 kb on - strand at 2918.914 kb on + strand at 2918.922 kb on - strand at 2919.074 kb on + strand at 2919.231 kb on - strand, within Dsui_2759 at 2919.253 kb on + strand, within Dsui_2759 at 2919.306 kb on - strand at 2919.801 kb on + strand, within Dsui_2759 at 2919.869 kb on + strand, within Dsui_2759 at 2920.235 kb on - strand at 2920.250 kb on - strand at 2920.278 kb on + strand, within Dsui_2759 at 2920.286 kb on - strand at 2920.569 kb on + strand at 2920.606 kb on + strand at 2920.730 kb on + strand at 2921.200 kb on + strand at 2921.208 kb on - strand at 2921.369 kb on + strand, within Dsui_2761 at 2921.498 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,918,123 + Dsui_2758 0.50 +0.6 2,918,238 - Dsui_2758 0.61 -3.0 2,918,276 + Dsui_2758 0.65 +0.8 2,918,276 + Dsui_2758 0.65 +1.1 2,918,325 - Dsui_2758 0.70 -1.4 2,918,627 + +1.0 2,918,671 + +1.2 2,918,671 + +0.3 2,918,671 + -0.5 2,918,706 - -2.8 2,918,877 + -0.6 2,918,885 - -0.0 2,918,914 + -0.2 2,918,922 - -2.6 2,919,074 + +0.8 2,919,231 - Dsui_2759 0.20 +0.6 2,919,253 + Dsui_2759 0.21 +0.7 2,919,306 - -0.1 2,919,801 + Dsui_2759 0.55 +1.0 2,919,869 + Dsui_2759 0.60 +1.2 2,920,235 - -2.8 2,920,250 - -3.7 2,920,278 + Dsui_2759 0.85 +1.8 2,920,286 - -0.4 2,920,569 + +1.2 2,920,606 + +0.2 2,920,730 + +0.9 2,921,200 + +3.3 2,921,208 - +0.5 2,921,369 + Dsui_2761 0.88 +1.3 2,921,498 + +1.4
Or see this region's nucleotide sequence