Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2509 and Dsui_2510 are separated by 11 nucleotides Dsui_2510 and Dsui_2511 are separated by 10 nucleotides Dsui_2511 and Dsui_2512 overlap by 17 nucleotides
Dsui_2509: Dsui_2509 - formate-dependent nitrite reductase, membrane component, at 2,656,153 to 2,657,223
_2509
Dsui_2510: Dsui_2510 - anaerobic dehydrogenase, typically selenocysteine-containing, at 2,657,235 to 2,660,321
_2510
Dsui_2511: Dsui_2511 - response regulator, at 2,660,332 to 2,660,964
_2511
Dsui_2512: Dsui_2512 - histidine kinase, at 2,660,948 to 2,662,669
_2512
Position (kb)
2657
2658
2659
2660
2661 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2656.250 kb on + strand at 2656.348 kb on - strand, within Dsui_2509 at 2656.432 kb on + strand, within Dsui_2509 at 2656.462 kb on - strand, within Dsui_2509 at 2656.462 kb on - strand, within Dsui_2509 at 2656.468 kb on + strand, within Dsui_2509 at 2656.495 kb on - strand, within Dsui_2509 at 2656.683 kb on + strand, within Dsui_2509 at 2656.755 kb on + strand, within Dsui_2509 at 2656.763 kb on - strand, within Dsui_2509 at 2656.770 kb on - strand, within Dsui_2509 at 2656.817 kb on + strand, within Dsui_2509 at 2656.823 kb on - strand, within Dsui_2509 at 2656.825 kb on - strand, within Dsui_2509 at 2656.944 kb on + strand, within Dsui_2509 at 2656.974 kb on - strand, within Dsui_2509 at 2657.001 kb on + strand, within Dsui_2509 at 2657.016 kb on + strand, within Dsui_2509 at 2657.038 kb on - strand, within Dsui_2509 at 2657.074 kb on - strand, within Dsui_2509 at 2657.096 kb on + strand, within Dsui_2509 at 2657.179 kb on + strand at 2657.187 kb on - strand at 2657.189 kb on + strand at 2657.197 kb on - strand at 2657.197 kb on - strand at 2657.394 kb on - strand at 2657.649 kb on + strand, within Dsui_2510 at 2657.930 kb on - strand, within Dsui_2510 at 2658.008 kb on - strand, within Dsui_2510 at 2658.038 kb on + strand, within Dsui_2510 at 2658.114 kb on - strand, within Dsui_2510 at 2658.142 kb on - strand, within Dsui_2510 at 2658.158 kb on + strand, within Dsui_2510 at 2658.158 kb on + strand, within Dsui_2510 at 2658.204 kb on - strand, within Dsui_2510 at 2658.209 kb on - strand, within Dsui_2510 at 2658.214 kb on - strand, within Dsui_2510 at 2658.497 kb on + strand, within Dsui_2510 at 2658.522 kb on - strand, within Dsui_2510 at 2658.559 kb on + strand, within Dsui_2510 at 2658.567 kb on - strand, within Dsui_2510 at 2658.681 kb on - strand, within Dsui_2510 at 2658.689 kb on - strand, within Dsui_2510 at 2658.717 kb on + strand, within Dsui_2510 at 2658.772 kb on - strand, within Dsui_2510 at 2658.799 kb on + strand, within Dsui_2510 at 2658.809 kb on + strand, within Dsui_2510 at 2658.812 kb on - strand, within Dsui_2510 at 2658.817 kb on - strand, within Dsui_2510 at 2658.882 kb on - strand, within Dsui_2510 at 2658.995 kb on + strand, within Dsui_2510 at 2659.002 kb on + strand, within Dsui_2510 at 2659.013 kb on + strand, within Dsui_2510 at 2659.110 kb on + strand, within Dsui_2510 at 2659.183 kb on - strand, within Dsui_2510 at 2659.184 kb on - strand, within Dsui_2510 at 2659.195 kb on - strand, within Dsui_2510 at 2659.221 kb on + strand, within Dsui_2510 at 2659.325 kb on + strand, within Dsui_2510 at 2659.385 kb on + strand, within Dsui_2510 at 2659.418 kb on + strand, within Dsui_2510 at 2659.418 kb on + strand, within Dsui_2510 at 2659.426 kb on - strand, within Dsui_2510 at 2659.441 kb on + strand, within Dsui_2510 at 2659.481 kb on - strand, within Dsui_2510 at 2659.481 kb on - strand, within Dsui_2510 at 2659.497 kb on + strand, within Dsui_2510 at 2659.567 kb on + strand, within Dsui_2510 at 2659.609 kb on - strand, within Dsui_2510 at 2659.630 kb on + strand, within Dsui_2510 at 2659.802 kb on + strand, within Dsui_2510 at 2659.825 kb on + strand, within Dsui_2510 at 2659.843 kb on - strand, within Dsui_2510 at 2659.903 kb on + strand, within Dsui_2510 at 2659.961 kb on + strand, within Dsui_2510 at 2660.047 kb on - strand at 2660.086 kb on + strand at 2660.169 kb on + strand at 2660.183 kb on - strand at 2660.200 kb on + strand at 2660.233 kb on - strand at 2660.243 kb on + strand at 2660.335 kb on + strand at 2660.343 kb on - strand at 2660.343 kb on - strand at 2660.343 kb on - strand at 2660.457 kb on - strand, within Dsui_2511 at 2660.477 kb on + strand, within Dsui_2511 at 2660.490 kb on - strand, within Dsui_2511 at 2660.585 kb on + strand, within Dsui_2511 at 2660.715 kb on + strand, within Dsui_2511 at 2660.730 kb on + strand, within Dsui_2511 at 2660.749 kb on - strand, within Dsui_2511 at 2660.765 kb on - strand, within Dsui_2511 at 2660.770 kb on + strand, within Dsui_2511 at 2660.860 kb on - strand, within Dsui_2511 at 2660.924 kb on + strand at 2660.952 kb on - strand at 2660.981 kb on + strand at 2661.062 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.073 kb on + strand at 2661.075 kb on - strand at 2661.148 kb on - strand, within Dsui_2512 at 2661.293 kb on + strand, within Dsui_2512 at 2661.301 kb on - strand, within Dsui_2512
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,656,250 + -0.3 2,656,348 - Dsui_2509 0.18 -0.7 2,656,432 + Dsui_2509 0.26 +1.4 2,656,462 - Dsui_2509 0.29 +0.8 2,656,462 - Dsui_2509 0.29 -0.1 2,656,468 + Dsui_2509 0.29 +0.1 2,656,495 - Dsui_2509 0.32 -1.8 2,656,683 + Dsui_2509 0.49 -0.6 2,656,755 + Dsui_2509 0.56 +1.1 2,656,763 - Dsui_2509 0.57 +1.7 2,656,770 - Dsui_2509 0.58 -2.0 2,656,817 + Dsui_2509 0.62 +0.7 2,656,823 - Dsui_2509 0.63 +0.1 2,656,825 - Dsui_2509 0.63 -3.3 2,656,944 + Dsui_2509 0.74 +0.5 2,656,974 - Dsui_2509 0.77 +0.3 2,657,001 + Dsui_2509 0.79 -3.0 2,657,016 + Dsui_2509 0.81 +0.0 2,657,038 - Dsui_2509 0.83 +1.0 2,657,074 - Dsui_2509 0.86 +0.4 2,657,096 + Dsui_2509 0.88 -0.3 2,657,179 + +0.1 2,657,187 - -0.1 2,657,189 + +0.1 2,657,197 - +0.1 2,657,197 - -2.3 2,657,394 - +1.4 2,657,649 + Dsui_2510 0.13 -0.3 2,657,930 - Dsui_2510 0.23 +1.0 2,658,008 - Dsui_2510 0.25 -0.1 2,658,038 + Dsui_2510 0.26 -1.3 2,658,114 - Dsui_2510 0.28 +0.6 2,658,142 - Dsui_2510 0.29 +0.0 2,658,158 + Dsui_2510 0.30 -2.5 2,658,158 + Dsui_2510 0.30 -0.0 2,658,204 - Dsui_2510 0.31 +0.2 2,658,209 - Dsui_2510 0.32 -0.2 2,658,214 - Dsui_2510 0.32 -1.5 2,658,497 + Dsui_2510 0.41 +1.2 2,658,522 - Dsui_2510 0.42 +0.9 2,658,559 + Dsui_2510 0.43 -0.8 2,658,567 - Dsui_2510 0.43 +0.3 2,658,681 - Dsui_2510 0.47 +0.7 2,658,689 - Dsui_2510 0.47 -0.4 2,658,717 + Dsui_2510 0.48 +0.8 2,658,772 - Dsui_2510 0.50 -3.4 2,658,799 + Dsui_2510 0.51 +0.9 2,658,809 + Dsui_2510 0.51 -0.1 2,658,812 - Dsui_2510 0.51 -0.6 2,658,817 - Dsui_2510 0.51 +0.1 2,658,882 - Dsui_2510 0.53 -0.7 2,658,995 + Dsui_2510 0.57 +0.3 2,659,002 + Dsui_2510 0.57 -0.0 2,659,013 + Dsui_2510 0.58 +0.7 2,659,110 + Dsui_2510 0.61 +0.9 2,659,183 - Dsui_2510 0.63 +0.8 2,659,184 - Dsui_2510 0.63 -1.1 2,659,195 - Dsui_2510 0.63 -0.3 2,659,221 + Dsui_2510 0.64 +1.1 2,659,325 + Dsui_2510 0.68 +0.4 2,659,385 + Dsui_2510 0.70 +0.5 2,659,418 + Dsui_2510 0.71 -0.2 2,659,418 + Dsui_2510 0.71 +0.1 2,659,426 - Dsui_2510 0.71 -0.8 2,659,441 + Dsui_2510 0.71 -0.8 2,659,481 - Dsui_2510 0.73 -2.5 2,659,481 - Dsui_2510 0.73 -0.6 2,659,497 + Dsui_2510 0.73 +0.0 2,659,567 + Dsui_2510 0.76 -0.0 2,659,609 - Dsui_2510 0.77 -0.5 2,659,630 + Dsui_2510 0.78 +0.3 2,659,802 + Dsui_2510 0.83 -0.2 2,659,825 + Dsui_2510 0.84 -0.6 2,659,843 - Dsui_2510 0.84 +0.6 2,659,903 + Dsui_2510 0.86 +1.0 2,659,961 + Dsui_2510 0.88 +1.6 2,660,047 - +1.5 2,660,086 + +1.3 2,660,169 + -0.9 2,660,183 - -0.3 2,660,200 + +0.2 2,660,233 - +1.0 2,660,243 + +0.4 2,660,335 + +1.4 2,660,343 - +0.8 2,660,343 - +0.4 2,660,343 - +0.1 2,660,457 - Dsui_2511 0.20 +0.1 2,660,477 + Dsui_2511 0.23 -1.1 2,660,490 - Dsui_2511 0.25 +0.7 2,660,585 + Dsui_2511 0.40 +1.0 2,660,715 + Dsui_2511 0.61 +0.4 2,660,730 + Dsui_2511 0.63 +0.4 2,660,749 - Dsui_2511 0.66 +0.5 2,660,765 - Dsui_2511 0.68 +0.0 2,660,770 + Dsui_2511 0.69 +1.4 2,660,860 - Dsui_2511 0.83 +0.7 2,660,924 + +0.6 2,660,952 - +2.1 2,660,981 + +0.8 2,661,062 + -0.3 2,661,073 + -1.5 2,661,073 + +0.3 2,661,073 + +0.3 2,661,073 + -2.7 2,661,075 - +0.6 2,661,148 - Dsui_2512 0.12 +0.8 2,661,293 + Dsui_2512 0.20 -0.7 2,661,301 - Dsui_2512 0.20 +0.7
Or see this region's nucleotide sequence