Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2203 and Dsui_2204 are separated by 132 nucleotides Dsui_2204 and Dsui_2205 are separated by 190 nucleotides
Dsui_2203: Dsui_2203 - enoyl-(acyl-carrier-protein) reductase (NADH), at 2,339,185 to 2,339,982
_2203
Dsui_2204: Dsui_2204 - ABC-type dipeptide transport system, periplasmic component, at 2,340,115 to 2,342,286
_2204
Dsui_2205: Dsui_2205 - aconitate hydratase 2, at 2,342,477 to 2,345,074
_2205
Position (kb)
2340
2341
2342
2343 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2339.169 kb on + strand at 2340.105 kb on + strand at 2340.207 kb on + strand at 2340.207 kb on + strand at 2340.207 kb on + strand at 2340.215 kb on - strand at 2340.264 kb on + strand at 2340.283 kb on + strand at 2340.283 kb on + strand at 2340.288 kb on + strand at 2340.288 kb on + strand at 2340.291 kb on - strand at 2340.296 kb on - strand at 2340.364 kb on + strand, within Dsui_2204 at 2340.446 kb on + strand, within Dsui_2204 at 2340.454 kb on - strand, within Dsui_2204 at 2340.579 kb on + strand, within Dsui_2204 at 2340.580 kb on - strand at 2340.605 kb on + strand, within Dsui_2204 at 2340.637 kb on - strand at 2340.717 kb on + strand, within Dsui_2204 at 2340.717 kb on + strand, within Dsui_2204 at 2340.725 kb on - strand, within Dsui_2204 at 2340.800 kb on + strand, within Dsui_2204 at 2340.852 kb on + strand, within Dsui_2204 at 2340.960 kb on + strand, within Dsui_2204 at 2340.998 kb on + strand, within Dsui_2204 at 2341.031 kb on + strand, within Dsui_2204 at 2341.039 kb on - strand, within Dsui_2204 at 2341.101 kb on + strand, within Dsui_2204 at 2341.320 kb on + strand, within Dsui_2204 at 2341.389 kb on + strand, within Dsui_2204 at 2341.549 kb on + strand, within Dsui_2204 at 2341.557 kb on - strand at 2341.578 kb on + strand, within Dsui_2204 at 2341.636 kb on + strand, within Dsui_2204 at 2341.641 kb on + strand, within Dsui_2204 at 2341.657 kb on - strand, within Dsui_2204 at 2341.703 kb on + strand, within Dsui_2204 at 2341.797 kb on + strand, within Dsui_2204 at 2341.818 kb on - strand at 2341.906 kb on + strand, within Dsui_2204 at 2341.906 kb on + strand, within Dsui_2204 at 2341.987 kb on - strand, within Dsui_2204 at 2342.077 kb on - strand at 2342.108 kb on - strand at 2342.123 kb on + strand at 2342.274 kb on - strand at 2342.301 kb on + strand at 2342.342 kb on + strand at 2342.368 kb on - strand at 2342.378 kb on + strand at 2342.378 kb on + strand at 2342.430 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,339,169 + -0.7 2,340,105 + -0.1 2,340,207 + -2.0 2,340,207 + -2.2 2,340,207 + -1.5 2,340,215 - -2.1 2,340,264 + -0.1 2,340,283 + -1.1 2,340,283 + -1.1 2,340,288 + -0.9 2,340,288 + -1.3 2,340,291 - -2.5 2,340,296 - -2.3 2,340,364 + Dsui_2204 0.11 -1.1 2,340,446 + Dsui_2204 0.15 -0.4 2,340,454 - Dsui_2204 0.16 -4.1 2,340,579 + Dsui_2204 0.21 -1.1 2,340,580 - -3.0 2,340,605 + Dsui_2204 0.23 -0.2 2,340,637 - -1.5 2,340,717 + Dsui_2204 0.28 -1.0 2,340,717 + Dsui_2204 0.28 -0.8 2,340,725 - Dsui_2204 0.28 -3.5 2,340,800 + Dsui_2204 0.32 -1.3 2,340,852 + Dsui_2204 0.34 -0.7 2,340,960 + Dsui_2204 0.39 -0.4 2,340,998 + Dsui_2204 0.41 -1.1 2,341,031 + Dsui_2204 0.42 -0.3 2,341,039 - Dsui_2204 0.43 -1.7 2,341,101 + Dsui_2204 0.45 -0.9 2,341,320 + Dsui_2204 0.55 -0.8 2,341,389 + Dsui_2204 0.59 -1.0 2,341,549 + Dsui_2204 0.66 -1.7 2,341,557 - -2.3 2,341,578 + Dsui_2204 0.67 -1.4 2,341,636 + Dsui_2204 0.70 -0.7 2,341,641 + Dsui_2204 0.70 -1.7 2,341,657 - Dsui_2204 0.71 -2.6 2,341,703 + Dsui_2204 0.73 +0.3 2,341,797 + Dsui_2204 0.77 -1.4 2,341,818 - -2.5 2,341,906 + Dsui_2204 0.82 +0.1 2,341,906 + Dsui_2204 0.82 +0.5 2,341,987 - Dsui_2204 0.86 -0.9 2,342,077 - -3.2 2,342,108 - -3.2 2,342,123 + -0.2 2,342,274 - -1.4 2,342,301 + +0.7 2,342,342 + +1.1 2,342,368 - -2.0 2,342,378 + +2.5 2,342,378 + -0.8 2,342,430 + +2.4
Or see this region's nucleotide sequence