Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2053 and Dsui_2054 are separated by 16 nucleotides Dsui_2054 and Dsui_2055 are separated by 194 nucleotides Dsui_2055 and Dsui_2056 are separated by 674 nucleotides
Dsui_2053: Dsui_2053 - HNH endonuclease, at 2,173,150 to 2,173,530
_2053
Dsui_2054: Dsui_2054 - hypothetical protein, at 2,173,547 to 2,173,915
_2054
Dsui_2055: Dsui_2055 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,174,110 to 2,174,913
_2055
Dsui_2056: Dsui_2056 - hypothetical protein, at 2,175,588 to 2,176,142
_2056
Position (kb)
2174
2175 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2173.147 kb on + strand at 2173.153 kb on + strand at 2173.160 kb on + strand at 2173.168 kb on - strand at 2173.181 kb on + strand at 2173.243 kb on + strand, within Dsui_2053 at 2173.359 kb on - strand, within Dsui_2053 at 2173.448 kb on + strand, within Dsui_2053 at 2173.503 kb on - strand at 2173.503 kb on - strand at 2173.525 kb on + strand at 2173.592 kb on + strand at 2173.624 kb on + strand, within Dsui_2054 at 2173.714 kb on - strand, within Dsui_2054 at 2173.778 kb on + strand, within Dsui_2054 at 2173.809 kb on - strand, within Dsui_2054 at 2173.941 kb on - strand at 2174.022 kb on - strand at 2174.058 kb on + strand at 2174.089 kb on - strand at 2174.099 kb on - strand at 2174.182 kb on + strand at 2174.189 kb on + strand at 2174.262 kb on - strand at 2174.271 kb on - strand at 2174.401 kb on - strand at 2174.654 kb on - strand, within Dsui_2055 at 2174.775 kb on - strand at 2174.823 kb on - strand, within Dsui_2055 at 2174.922 kb on - strand at 2174.927 kb on - strand at 2174.953 kb on - strand at 2175.053 kb on + strand at 2175.086 kb on + strand at 2175.096 kb on + strand at 2175.126 kb on + strand at 2175.196 kb on + strand at 2175.244 kb on + strand at 2175.244 kb on + strand at 2175.244 kb on + strand at 2175.288 kb on - strand at 2175.288 kb on - strand at 2175.288 kb on - strand at 2175.288 kb on - strand at 2175.288 kb on - strand at 2175.314 kb on + strand at 2175.361 kb on - strand at 2175.366 kb on - strand at 2175.397 kb on - strand at 2175.424 kb on - strand at 2175.424 kb on - strand at 2175.434 kb on - strand at 2175.441 kb on + strand at 2175.449 kb on - strand at 2175.484 kb on - strand at 2175.497 kb on + strand at 2175.497 kb on + strand at 2175.505 kb on - strand at 2175.507 kb on + strand at 2175.621 kb on - strand at 2175.678 kb on - strand, within Dsui_2056 at 2175.682 kb on + strand, within Dsui_2056 at 2175.682 kb on + strand, within Dsui_2056 at 2175.682 kb on + strand, within Dsui_2056 at 2175.690 kb on - strand, within Dsui_2056 at 2175.690 kb on - strand, within Dsui_2056 at 2175.690 kb on - strand, within Dsui_2056 at 2175.698 kb on + strand, within Dsui_2056 at 2175.706 kb on - strand, within Dsui_2056 at 2175.719 kb on + strand, within Dsui_2056 at 2175.719 kb on + strand, within Dsui_2056 at 2175.727 kb on - strand, within Dsui_2056 at 2175.727 kb on - strand, within Dsui_2056 at 2175.760 kb on - strand, within Dsui_2056 at 2175.760 kb on - strand, within Dsui_2056 at 2175.760 kb on - strand, within Dsui_2056 at 2175.801 kb on - strand at 2175.805 kb on + strand, within Dsui_2056 at 2175.811 kb on + strand, within Dsui_2056 at 2175.831 kb on - strand, within Dsui_2056 at 2175.867 kb on - strand, within Dsui_2056 at 2175.877 kb on - strand, within Dsui_2056 at 2175.887 kb on + strand, within Dsui_2056 at 2175.895 kb on + strand, within Dsui_2056 at 2175.912 kb on - strand, within Dsui_2056
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 2,173,147 + -0.9 2,173,153 + +0.9 2,173,160 + -2.4 2,173,168 - -0.0 2,173,181 + -1.7 2,173,243 + Dsui_2053 0.24 +0.2 2,173,359 - Dsui_2053 0.55 +0.9 2,173,448 + Dsui_2053 0.78 -1.2 2,173,503 - +1.0 2,173,503 - -0.2 2,173,525 + -0.9 2,173,592 + -0.1 2,173,624 + Dsui_2054 0.21 -0.5 2,173,714 - Dsui_2054 0.45 +0.9 2,173,778 + Dsui_2054 0.63 +0.2 2,173,809 - Dsui_2054 0.71 +1.0 2,173,941 - +1.6 2,174,022 - -1.5 2,174,058 + +0.7 2,174,089 - -1.6 2,174,099 - -2.1 2,174,182 + +0.1 2,174,189 + +0.4 2,174,262 - -0.1 2,174,271 - +0.5 2,174,401 - -0.8 2,174,654 - Dsui_2055 0.68 -0.1 2,174,775 - -0.3 2,174,823 - Dsui_2055 0.89 +0.9 2,174,922 - +0.3 2,174,927 - +0.3 2,174,953 - -1.5 2,175,053 + -3.9 2,175,086 + -0.7 2,175,096 + +0.1 2,175,126 + -0.9 2,175,196 + -1.3 2,175,244 + +0.7 2,175,244 + +0.9 2,175,244 + -0.7 2,175,288 - +0.1 2,175,288 - +0.7 2,175,288 - -0.8 2,175,288 - +1.4 2,175,288 - +0.5 2,175,314 + -1.4 2,175,361 - -1.4 2,175,366 - -0.9 2,175,397 - +0.7 2,175,424 - +0.3 2,175,424 - -0.3 2,175,434 - +0.2 2,175,441 + -2.3 2,175,449 - +0.2 2,175,484 - -1.6 2,175,497 + +1.0 2,175,497 + -2.3 2,175,505 - -0.7 2,175,507 + +0.1 2,175,621 - +1.7 2,175,678 - Dsui_2056 0.16 -3.2 2,175,682 + Dsui_2056 0.17 +0.0 2,175,682 + Dsui_2056 0.17 -0.8 2,175,682 + Dsui_2056 0.17 +0.7 2,175,690 - Dsui_2056 0.18 -0.5 2,175,690 - Dsui_2056 0.18 +0.8 2,175,690 - Dsui_2056 0.18 -1.3 2,175,698 + Dsui_2056 0.20 -0.4 2,175,706 - Dsui_2056 0.21 +0.1 2,175,719 + Dsui_2056 0.24 +1.3 2,175,719 + Dsui_2056 0.24 -0.7 2,175,727 - Dsui_2056 0.25 +0.1 2,175,727 - Dsui_2056 0.25 -1.0 2,175,760 - Dsui_2056 0.31 -0.7 2,175,760 - Dsui_2056 0.31 +0.9 2,175,760 - Dsui_2056 0.31 -0.4 2,175,801 - +2.0 2,175,805 + Dsui_2056 0.39 -4.2 2,175,811 + Dsui_2056 0.40 +0.3 2,175,831 - Dsui_2056 0.44 +0.1 2,175,867 - Dsui_2056 0.50 +0.8 2,175,877 - Dsui_2056 0.52 -0.2 2,175,887 + Dsui_2056 0.54 -0.7 2,175,895 + Dsui_2056 0.55 -1.0 2,175,912 - Dsui_2056 0.58 +0.1
Or see this region's nucleotide sequence