Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1716 and Dsui_1717 are separated by 179 nucleotides Dsui_1717 and Dsui_1718 are separated by 21 nucleotides Dsui_1718 and Dsui_1719 are separated by 18 nucleotides
Dsui_1716: Dsui_1716 - methyl-accepting chemotaxis protein, at 1,805,245 to 1,806,825
_1716
Dsui_1717: Dsui_1717 - chemotaxis signal transduction protein, at 1,807,005 to 1,807,973
_1717
Dsui_1718: Dsui_1718 - chemotaxis signal transduction protein, at 1,807,995 to 1,808,933
_1718
Dsui_1719: Dsui_1719 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,808,952 to 1,809,344
_1719
Position (kb)
1807
1808 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1806.011 kb on - strand, within Dsui_1716 at 1806.027 kb on - strand, within Dsui_1716 at 1806.123 kb on - strand, within Dsui_1716 at 1806.158 kb on + strand, within Dsui_1716 at 1806.166 kb on - strand, within Dsui_1716 at 1806.200 kb on - strand, within Dsui_1716 at 1806.218 kb on + strand, within Dsui_1716 at 1806.306 kb on - strand at 1806.376 kb on + strand, within Dsui_1716 at 1806.472 kb on + strand, within Dsui_1716 at 1806.537 kb on - strand, within Dsui_1716 at 1806.564 kb on + strand, within Dsui_1716 at 1806.571 kb on + strand, within Dsui_1716 at 1806.580 kb on - strand, within Dsui_1716 at 1806.580 kb on - strand, within Dsui_1716 at 1806.607 kb on + strand, within Dsui_1716 at 1806.615 kb on - strand, within Dsui_1716 at 1806.650 kb on - strand, within Dsui_1716 at 1806.692 kb on - strand at 1806.710 kb on - strand at 1806.771 kb on + strand at 1806.774 kb on - strand at 1806.783 kb on + strand at 1806.783 kb on + strand at 1806.783 kb on + strand at 1806.783 kb on + strand at 1806.791 kb on - strand at 1806.791 kb on - strand at 1806.791 kb on - strand at 1806.791 kb on - strand at 1806.819 kb on + strand at 1806.882 kb on + strand at 1806.882 kb on + strand at 1806.889 kb on + strand at 1806.890 kb on - strand at 1806.999 kb on + strand at 1806.999 kb on - strand at 1807.001 kb on + strand at 1807.002 kb on - strand at 1807.002 kb on - strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.006 kb on + strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.014 kb on - strand at 1807.016 kb on + strand at 1807.016 kb on + strand at 1807.016 kb on + strand at 1807.024 kb on - strand at 1807.024 kb on - strand at 1807.024 kb on - strand at 1807.054 kb on + strand at 1807.117 kb on + strand, within Dsui_1717 at 1807.166 kb on + strand, within Dsui_1717 at 1807.205 kb on - strand, within Dsui_1717 at 1807.222 kb on + strand, within Dsui_1717 at 1807.263 kb on + strand, within Dsui_1717 at 1807.271 kb on - strand, within Dsui_1717 at 1807.345 kb on + strand, within Dsui_1717 at 1807.393 kb on + strand, within Dsui_1717 at 1807.600 kb on + strand, within Dsui_1717 at 1807.726 kb on + strand, within Dsui_1717 at 1807.726 kb on + strand, within Dsui_1717 at 1807.726 kb on + strand, within Dsui_1717 at 1807.726 kb on + strand, within Dsui_1717 at 1807.734 kb on - strand, within Dsui_1717 at 1807.734 kb on - strand, within Dsui_1717 at 1807.765 kb on + strand, within Dsui_1717 at 1807.773 kb on - strand, within Dsui_1717 at 1807.784 kb on + strand, within Dsui_1717 at 1807.792 kb on - strand, within Dsui_1717 at 1807.792 kb on - strand, within Dsui_1717 at 1807.846 kb on + strand, within Dsui_1717 at 1807.942 kb on + strand at 1807.950 kb on - strand at 1807.968 kb on + strand at 1807.968 kb on + strand at 1807.970 kb on - strand at 1807.978 kb on + strand at 1808.046 kb on + strand at 1808.046 kb on - strand at 1808.054 kb on - strand at 1808.073 kb on + strand at 1808.074 kb on - strand at 1808.118 kb on - strand, within Dsui_1718 at 1808.127 kb on - strand, within Dsui_1718 at 1808.148 kb on + strand, within Dsui_1718 at 1808.154 kb on - strand, within Dsui_1718 at 1808.235 kb on + strand, within Dsui_1718 at 1808.281 kb on - strand, within Dsui_1718 at 1808.437 kb on + strand, within Dsui_1718 at 1808.648 kb on - strand, within Dsui_1718 at 1808.709 kb on + strand, within Dsui_1718 at 1808.722 kb on - strand, within Dsui_1718 at 1808.749 kb on + strand, within Dsui_1718 at 1808.749 kb on + strand, within Dsui_1718 at 1808.846 kb on + strand at 1808.921 kb on + strand at 1808.943 kb on + strand at 1808.961 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,806,011 - Dsui_1716 0.48 +0.5 1,806,027 - Dsui_1716 0.49 -3.9 1,806,123 - Dsui_1716 0.56 -0.6 1,806,158 + Dsui_1716 0.58 +0.7 1,806,166 - Dsui_1716 0.58 -0.4 1,806,200 - Dsui_1716 0.60 +0.0 1,806,218 + Dsui_1716 0.62 +1.2 1,806,306 - -1.5 1,806,376 + Dsui_1716 0.72 +0.5 1,806,472 + Dsui_1716 0.78 +0.8 1,806,537 - Dsui_1716 0.82 -0.1 1,806,564 + Dsui_1716 0.83 +0.0 1,806,571 + Dsui_1716 0.84 -0.2 1,806,580 - Dsui_1716 0.84 -0.5 1,806,580 - Dsui_1716 0.84 +0.8 1,806,607 + Dsui_1716 0.86 +0.8 1,806,615 - Dsui_1716 0.87 +1.1 1,806,650 - Dsui_1716 0.89 +0.1 1,806,692 - +0.7 1,806,710 - -0.2 1,806,771 + +0.7 1,806,774 - -1.7 1,806,783 + +0.5 1,806,783 + -0.2 1,806,783 + +0.7 1,806,783 + +0.0 1,806,791 - +1.7 1,806,791 - -2.6 1,806,791 - -0.8 1,806,791 - +0.5 1,806,819 + +1.4 1,806,882 + +0.2 1,806,882 + +1.0 1,806,889 + +0.9 1,806,890 - -1.2 1,806,999 + +1.2 1,806,999 - -0.3 1,807,001 + +1.0 1,807,002 - -0.9 1,807,002 - -1.5 1,807,006 + +0.0 1,807,006 + +1.2 1,807,006 + +0.4 1,807,006 + +1.1 1,807,006 + +2.1 1,807,006 + +1.5 1,807,006 + +1.2 1,807,006 + +0.9 1,807,006 + +0.9 1,807,006 + +1.3 1,807,006 + +1.1 1,807,006 + +1.8 1,807,006 + +1.1 1,807,006 + +0.7 1,807,006 + +1.1 1,807,006 + -0.5 1,807,006 + +0.8 1,807,006 + +1.1 1,807,006 + +0.5 1,807,006 + +1.1 1,807,006 + +0.5 1,807,006 + +0.3 1,807,006 + +1.3 1,807,006 + +1.1 1,807,006 + +1.2 1,807,006 + -0.9 1,807,006 + +1.0 1,807,006 + +1.3 1,807,006 + +0.7 1,807,006 + +1.1 1,807,006 + +0.9 1,807,006 + +1.2 1,807,006 + +1.1 1,807,006 + +1.0 1,807,006 + +1.5 1,807,006 + +0.5 1,807,006 + +1.0 1,807,006 + +1.6 1,807,006 + +1.3 1,807,006 + +0.6 1,807,006 + +0.7 1,807,006 + +1.1 1,807,006 + +1.2 1,807,006 + +1.2 1,807,006 + +1.3 1,807,006 + +1.8 1,807,006 + +1.2 1,807,006 + +0.4 1,807,006 + +0.8 1,807,006 + +1.8 1,807,006 + +0.6 1,807,006 + +1.3 1,807,006 + +1.1 1,807,006 + +0.4 1,807,006 + +0.1 1,807,006 + -0.1 1,807,006 + +0.2 1,807,006 + +1.3 1,807,006 + +2.3 1,807,006 + +0.9 1,807,014 - +0.4 1,807,014 - +0.3 1,807,014 - -0.0 1,807,014 - +0.8 1,807,014 - -0.4 1,807,014 - -1.9 1,807,014 - -2.8 1,807,014 - -1.1 1,807,014 - +1.4 1,807,014 - +1.1 1,807,014 - -0.7 1,807,014 - -0.8 1,807,014 - -2.4 1,807,014 - -0.9 1,807,014 - +0.4 1,807,014 - -0.4 1,807,014 - +0.0 1,807,014 - +0.8 1,807,014 - -0.6 1,807,014 - -3.2 1,807,014 - +0.8 1,807,014 - +0.5 1,807,014 - -0.4 1,807,014 - -1.6 1,807,014 - +1.1 1,807,014 - -1.3 1,807,014 - +0.3 1,807,014 - +0.4 1,807,014 - -0.8 1,807,014 - -0.5 1,807,014 - +0.3 1,807,014 - +1.0 1,807,014 - -0.4 1,807,016 + +1.4 1,807,016 + +0.5 1,807,016 + +0.2 1,807,024 - +0.1 1,807,024 - -0.0 1,807,024 - -1.2 1,807,054 + +0.1 1,807,117 + Dsui_1717 0.12 +1.1 1,807,166 + Dsui_1717 0.17 +0.3 1,807,205 - Dsui_1717 0.21 +0.1 1,807,222 + Dsui_1717 0.22 +0.8 1,807,263 + Dsui_1717 0.27 +0.8 1,807,271 - Dsui_1717 0.27 +1.3 1,807,345 + Dsui_1717 0.35 +1.3 1,807,393 + Dsui_1717 0.40 +2.1 1,807,600 + Dsui_1717 0.61 +1.1 1,807,726 + Dsui_1717 0.74 +0.4 1,807,726 + Dsui_1717 0.74 +1.1 1,807,726 + Dsui_1717 0.74 +0.7 1,807,726 + Dsui_1717 0.74 +0.7 1,807,734 - Dsui_1717 0.75 +1.0 1,807,734 - Dsui_1717 0.75 -1.1 1,807,765 + Dsui_1717 0.78 +1.4 1,807,773 - Dsui_1717 0.79 +0.3 1,807,784 + Dsui_1717 0.80 -0.1 1,807,792 - Dsui_1717 0.81 -0.9 1,807,792 - Dsui_1717 0.81 +0.5 1,807,846 + Dsui_1717 0.87 +0.8 1,807,942 + +1.0 1,807,950 - +1.1 1,807,968 + +0.5 1,807,968 + +1.1 1,807,970 - -0.7 1,807,978 + +0.8 1,808,046 + +0.8 1,808,046 - +0.0 1,808,054 - +0.1 1,808,073 + +0.8 1,808,074 - +0.5 1,808,118 - Dsui_1718 0.13 +0.1 1,808,127 - Dsui_1718 0.14 +0.5 1,808,148 + Dsui_1718 0.16 +0.9 1,808,154 - Dsui_1718 0.17 +0.4 1,808,235 + Dsui_1718 0.26 +1.2 1,808,281 - Dsui_1718 0.30 +0.4 1,808,437 + Dsui_1718 0.47 +0.8 1,808,648 - Dsui_1718 0.70 +0.6 1,808,709 + Dsui_1718 0.76 +1.1 1,808,722 - Dsui_1718 0.77 +0.3 1,808,749 + Dsui_1718 0.80 +1.1 1,808,749 + Dsui_1718 0.80 +1.3 1,808,846 + +0.8 1,808,921 + +1.9 1,808,943 + +1.1 1,808,961 - +0.6
Or see this region's nucleotide sequence