Experiment: No stressor control+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1542 and Dsui_1543 are separated by 9 nucleotides Dsui_1543 and Dsui_1544 are separated by 73 nucleotides
Dsui_1542: Dsui_1542 - small-conductance mechanosensitive channel, at 1,602,128 to 1,603,423
_1542
Dsui_1543: Dsui_1543 - tRNA/rRNA cytosine-C5-methylase, at 1,603,433 to 1,604,761
_1543
Dsui_1544: Dsui_1544 - Protein of unknown function (DUF3108), at 1,604,835 to 1,605,572
_1544
Position (kb)
1603
1604
1605 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1602.485 kb on + strand, within Dsui_1542 at 1602.509 kb on - strand, within Dsui_1542 at 1602.556 kb on - strand, within Dsui_1542 at 1602.770 kb on - strand, within Dsui_1542 at 1602.817 kb on - strand, within Dsui_1542 at 1602.888 kb on - strand, within Dsui_1542 at 1602.936 kb on - strand, within Dsui_1542 at 1602.948 kb on - strand, within Dsui_1542 at 1603.031 kb on - strand, within Dsui_1542 at 1603.118 kb on - strand, within Dsui_1542 at 1603.334 kb on - strand at 1603.430 kb on + strand at 1603.430 kb on + strand at 1603.652 kb on + strand, within Dsui_1543 at 1603.652 kb on + strand, within Dsui_1543 at 1603.660 kb on - strand, within Dsui_1543 at 1603.661 kb on - strand, within Dsui_1543 at 1603.770 kb on - strand, within Dsui_1543 at 1603.797 kb on - strand, within Dsui_1543 at 1603.797 kb on - strand, within Dsui_1543 at 1603.892 kb on - strand, within Dsui_1543 at 1603.894 kb on + strand at 1603.894 kb on + strand at 1603.923 kb on - strand, within Dsui_1543 at 1604.095 kb on + strand at 1604.254 kb on + strand at 1604.280 kb on - strand, within Dsui_1543 at 1604.307 kb on + strand at 1604.378 kb on + strand, within Dsui_1543 at 1604.380 kb on - strand, within Dsui_1543 at 1604.568 kb on - strand, within Dsui_1543 at 1605.085 kb on + strand at 1605.113 kb on - strand, within Dsui_1544 at 1605.120 kb on - strand, within Dsui_1544 at 1605.303 kb on + strand at 1605.397 kb on + strand, within Dsui_1544 at 1605.751 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stressor control+ 10 mM ClO4 and 20 mM lactate remove 1,602,485 + Dsui_1542 0.28 +0.0 1,602,509 - Dsui_1542 0.29 +2.1 1,602,556 - Dsui_1542 0.33 +0.8 1,602,770 - Dsui_1542 0.50 -0.3 1,602,817 - Dsui_1542 0.53 +1.2 1,602,888 - Dsui_1542 0.59 +0.9 1,602,936 - Dsui_1542 0.62 +0.7 1,602,948 - Dsui_1542 0.63 -1.5 1,603,031 - Dsui_1542 0.70 +0.7 1,603,118 - Dsui_1542 0.76 +0.4 1,603,334 - +1.8 1,603,430 + +0.1 1,603,430 + -2.4 1,603,652 + Dsui_1543 0.16 +0.0 1,603,652 + Dsui_1543 0.16 -4.4 1,603,660 - Dsui_1543 0.17 +0.6 1,603,661 - Dsui_1543 0.17 -0.5 1,603,770 - Dsui_1543 0.25 -0.4 1,603,797 - Dsui_1543 0.27 +1.7 1,603,797 - Dsui_1543 0.27 -0.3 1,603,892 - Dsui_1543 0.35 +0.4 1,603,894 + +1.0 1,603,894 + +1.5 1,603,923 - Dsui_1543 0.37 +1.5 1,604,095 + +1.2 1,604,254 + -1.0 1,604,280 - Dsui_1543 0.64 +0.6 1,604,307 + +1.8 1,604,378 + Dsui_1543 0.71 -1.1 1,604,380 - Dsui_1543 0.71 +0.8 1,604,568 - Dsui_1543 0.85 -1.6 1,605,085 + -2.6 1,605,113 - Dsui_1544 0.38 -1.4 1,605,120 - Dsui_1544 0.39 -1.7 1,605,303 + -4.9 1,605,397 + Dsui_1544 0.76 -3.2 1,605,751 - -2.1
Or see this region's nucleotide sequence